Gene Synpcc7942_1004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1004 
Symbol 
ID3773932 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1015963 
End bp1016316 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content55% 
IMG OID637799424 
Producthypothetical protein 
Protein accessionYP_400021 
Protein GI81299813 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.193395 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGCGTC CCGAAGTAAG CGATCGCGGC AATCTCTTGC ACAACCTACC CTTGTCTGCG 
ATCGCAGAGC AATTCATTCC GCTGGTGCAG GGCGATCGCT GCCGGATTGA GCAGATTATT
TCGACTGGCC AGGTATCACC ACCTGACTTT TGGTACGACC AAGATGAGAC CGAGTTCGTG
CTGATTCTGC AAGGTGAAGC CGAGTTGGAA TGCGAAGGTG CAGCACCCCA ACGGTTACGA
GTCGGAGATT GGCGAATTTT GCCACCGCAC TGTCGCCACC GCGTCAACTA CACCCAAGCG
GATCCTCCAA CCATTTGGCT GGCAGTTTTT TATCCCGCTG CAACTGGCAC TTGA
 
Protein sequence
MERPEVSDRG NLLHNLPLSA IAEQFIPLVQ GDRCRIEQII STGQVSPPDF WYDQDETEFV 
LILQGEAELE CEGAAPQRLR VGDWRILPPH CRHRVNYTQA DPPTIWLAVF YPAATGT