| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_0970 |
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| Symbol | |
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| ID | 3775358 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | + |
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| Start bp | 976311 |
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| End bp | 977882 |
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| Gene Length | 1572 bp |
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| Protein Length | 523 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637799389 |
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| Product | phytoene dehydrogenase-like |
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| Protein accession | YP_399987 |
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| Protein GI | 81299779 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
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| TIGRFAM ID | [TIGR02733] C-3',4' desaturase CrtD |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.354104 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.67541 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGTTG AGCCTCCTTC GGTTGCGGTC ATTGGTGCAG GCATTGGCGG TTTAACGGCG
GCAGCGCTCC TAGCAGCGCG AGGCTTCACC GTCACGGTTT ATGAACAAGC CGCGATCGCG
GGTGGATGTG CTTCGACTTT TCGGCGGCGT GGCTTCACCT TCGACGTCGG GGCGACTCAA
GTTGCAGGCT TGGAACCGGG TGGTATTCAC GCCCAAATCT TCGCGGAACT GGGACTGGAA
TTACCGGTAG CCAAAATTTG CGATCCAGCC TGCGCGGTTT GGCTCCCCGG CGAATCGGAA
CCCGTGCGCG TTTGGCACGA TCGCGATCGC TGGAAAGCAG AACGAGAGCG TTGGTTTCCT
GGCAGTGAAC CGTTCTGGTC GTTGATGCAG CAGCTCTTTC AGTTGGGCTG GCAATTTCAA
CAGCGTCAGC CAGTGTTGCC GCCGCGCAAC CTTTGGGATT TGCAGCAGTT GATTAGCGCA
GTGCGCCCCG AAACCTTGCT GACGGCACCC TATGCGCTGC TGACCGTCGG GCAGGTCTTG
AATCTGCTGG GTCTGGGGGG CGATCGCCGC CTCAAGACGT TTCTGGATAT TCAGCTCAAG
CTCTATTCCC AGTGCGGTGC CGATGAAACA GCAGTGCTCT ACGCTGCGAC TGCCTTGGCT
CTCTCGCAAG CGCCCTACGG GCTCTATCAC CTCGAAGGCA GCATGCAAGT CCTCAGCGAT
CGCCTGCTGG AAGGGCTGGA GAAGCACGGC GGCCAAATTC GCTACCGGCA ACGGGTAGAA
GCGATCGAAA CCATGGGCGA TCGCGTGCGG GGCATCCGAG TGCGTGATCA ACGGACGCAG
TCTGTCGAAG CGATCGCGGC GGATCATGTC GTCGCCAATG TCACTGCTGC GGATTTACTA
CGGCTCCTCG GATCAGCGGT CGAAACCCTA CCGGCCTTGA ACGGCTATCA ACAGCGCCTA
GCGAAAACTC CCACTCCCTC TGGCGCGTTT GTCCTCTACC TTGGCGTGGA TGCTGCCGCT
CTTCCGGTGG ACTGTCCGCC CCACCTGCAA TTCCTGTTTG ATCCGGCAGG CCCTCTTGGC
GAAAACAATT CCCTCTTCGT TTCTGTCAGT CGCCCCGATG ATGGTCGGGC ACCCGCGGGA
CAAGCCACGA TCGTTGCTTC GACTTTCACG GATCTCGATC GCTGGAGCCA GACCGAAGAC
TACGCTGCTC TCAAGCAGGA CTACACCGAG ACAATGTTGG CGCGCCTGGG TCAATATTTC
GACCTGCGGC CTGAGCATCT CCGTCATGTG GAAGCTGGGA CGCCGCGTAC CTTTGCCCGC
TACACCGATC GCGATCGTGG CAGTGTCGGG GGGTTAGGCA TGCGAGTGAG TACCTTTGGG
CCCTTCGGCT TTGCCAATCG CACGCCGGTG AAAAATCTCT GGCTGGTCGG CGACTCCACC
CATCCTGGCG AAGGCACTGC CGGCGTCAGC TATTCGGCCC AAACGGTGAT GCGACAAATT
CTGGCGCAGC ATCCTGAAGT CCAGCCAGCA AAAACCCGCC AGCCGGAGCC AGCGGGTTTG
TTACAGCGCT AG
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| Protein sequence | MPVEPPSVAV IGAGIGGLTA AALLAARGFT VTVYEQAAIA GGCASTFRRR GFTFDVGATQ
VAGLEPGGIH AQIFAELGLE LPVAKICDPA CAVWLPGESE PVRVWHDRDR WKAERERWFP
GSEPFWSLMQ QLFQLGWQFQ QRQPVLPPRN LWDLQQLISA VRPETLLTAP YALLTVGQVL
NLLGLGGDRR LKTFLDIQLK LYSQCGADET AVLYAATALA LSQAPYGLYH LEGSMQVLSD
RLLEGLEKHG GQIRYRQRVE AIETMGDRVR GIRVRDQRTQ SVEAIAADHV VANVTAADLL
RLLGSAVETL PALNGYQQRL AKTPTPSGAF VLYLGVDAAA LPVDCPPHLQ FLFDPAGPLG
ENNSLFVSVS RPDDGRAPAG QATIVASTFT DLDRWSQTED YAALKQDYTE TMLARLGQYF
DLRPEHLRHV EAGTPRTFAR YTDRDRGSVG GLGMRVSTFG PFGFANRTPV KNLWLVGDST
HPGEGTAGVS YSAQTVMRQI LAQHPEVQPA KTRQPEPAGL LQR
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