Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_0965 |
Symbol | |
ID | 3775353 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | + |
Start bp | 972388 |
End bp | 973350 |
Gene Length | 963 bp |
Protein Length | 320 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637799384 |
Product | ammonium transporter protein Amt1-like |
Protein accession | YP_399982 |
Protein GI | 81299774 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1218] 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase |
TIGRFAM ID | [TIGR01330] 3'(2'),5'-bisphosphate nucleotidase, HAL2 family |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.187735 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.504662 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCTTGC TGCCTGACTG TCTTGAACTC CACGCCGCTC TGACTGCGGT GCAAGCGGCT GCCCACCTCT GCCAAACGGT GCGCCACGAT CGCCAAGCCA CCGCCCTGCG CAAACCCGAT CAAAGTCCGG TGACTGTAGC GGACTACGGT GCCCAAGCCC TGATTGCGGC GCATCTCAGT GAAACTTTCC CTGCGGATCC GCTGGTGGGA GAAGAAGATG CCAGTTTGCT AGCAGACGAT GTGCTGGATC AGATTACCGA CTATGTCCGG CTACAGCGAT CGCAAGTCTC TGCTGAAACT GTGGCGGCTT GGATTCAGCA AGGCAAAGGT CAACCCGGCG ATCGCTTCTG GACTCTCGAC CCTATTGACG GCACCAAAGG CTATGTACGC GGCGATCAGT ATGCGATCGC GCTGGCTTTG ATTGTGGACG GACAGGTAGA AGTAGCGGCG ATCGCCGCGC CGGCCCTCGA TGGCCCAGAT GGGGCTCTCT TTGCTGCCGT ACGGGGTCAA GGTGCTTGGC AAATCCAAGG CGATCACGTC ATTCCACTGC AAGTTAGCGA TCGCCAGGCT GCTGCTGCCC TCCGCCTCGA AAGTGTGGAA CGGGAACACG GCCATCCTGC TTGGCAGGAT GCGATCGCCA CTCGGGCGGG ATTGGTGACC CCAGCGCGAG CCGTCGATAG CTTGGTCAAA TACGCGCTGA TTGCCCGCGG TGAAGCAGAC CTCTACTTAC GGCTGGTCAA TCCCGCAAGC GATCGCCGCG AGAACATTTG GGACCATGCA GCGGGGGTGT TGCTGCTCCA AGAAGCGGGC GGCCGTGTTA GCGATCAAAC TGGGCGATCG CTAGACTTTG GGGCGGGCAG CAAGCTCTTC AATAACCAGG GCATCGCCGC CAGCAATGCC GCCTGCCACG AGGCAATTGT GGCAGCGCTA CAGGCTCAGC AACCCCTGCT TGAACTGGTT TAG
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Protein sequence | MTLLPDCLEL HAALTAVQAA AHLCQTVRHD RQATALRKPD QSPVTVADYG AQALIAAHLS ETFPADPLVG EEDASLLADD VLDQITDYVR LQRSQVSAET VAAWIQQGKG QPGDRFWTLD PIDGTKGYVR GDQYAIALAL IVDGQVEVAA IAAPALDGPD GALFAAVRGQ GAWQIQGDHV IPLQVSDRQA AAALRLESVE REHGHPAWQD AIATRAGLVT PARAVDSLVK YALIARGEAD LYLRLVNPAS DRRENIWDHA AGVLLLQEAG GRVSDQTGRS LDFGAGSKLF NNQGIAASNA ACHEAIVAAL QAQQPLLELV
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