| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_0890 |
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| Symbol | |
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| ID | 3774068 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | + |
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| Start bp | 896748 |
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| End bp | 901358 |
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| Gene Length | 4611 bp |
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| Protein Length | 1536 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637799307 |
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| Product | glutamate synthase (ferredoxin) |
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| Protein accession | YP_399907 |
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| Protein GI | 81299699 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0069] Glutamate synthase domain 2 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00390315 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.000127994 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAATCAGC ATTCTGTTCA TTCGTCTTCT CACCCTACCT ACCAAGGCCC ACGCTGGCTT
GTTGAAGAGC GTGATGCCTG CGGTGTCGGT TTTGTGGCCG ATCAACAAGG TCGTGCCAGC
CACGACTTGG TTGAGAAGTC CTTGCGAGCC TTGGGCTGTA TGGAGCACCG TGGCGGCTGT
AGTGCTGACT CTGATTCCGG CGATGGCGCT GGCTTGATGA CAGCGATCCC GACTGATCTG
CTGAAAACTT GGCTTGGTGC TGCGGCTCCG GCTGACCTGT CGAGCGTTGG CTTGGGGATG
GTTTTTCTGC CCCAACATGG CGCTGAAGCC ACGATCGCCC GGCAGCTGAT TGAGCAAATT
GTTGCTGAGG AAAACCTGCA GTTCTTGGGC TGGCGCTTGG TCCCCACCCG CCCCGAGGTT
TTGGGCCAAC AGGCACGGGC AAACCTGCCC CGAATTGAGC AGTGCTTTAT TGCCAGCGAA
CAGCTACGGG ACGATGAGTT CGAGCGGCAG CTCTACCTCG TACGCAAACG GGTAGAAACT
GCAGTCAAAA AGGCCCTTGG CACTGCTAGC GAAGATTTTT ACATTTGCTC GCTTTCCAGC
CGCACTGTTG TCTACAAAGG CATGGTGCGA TCGGAAGTGC TCGGTCAGTT CTACACCGAC
CTGACTAATC CGGCATACAC CAGCAACTTT GGTGTTTACC ACCGCCGCTT CAGTACTAAC
ACCATGCCCA AGTGGCCCTT GGCGCAGCCG ATGCGCTTCC TGGGACACAA CGGTGAAATC
AATACGCTGC TGGGCAACAT CAACTGGATG ATGGCGCGGC AAGCCGATCT CCAACACCCT
GCCTGGGGCG ATCGCATTGG CGATCTGCTG CCAGTGGTTG ACCTCAACCG GAGTGACTCC
GCCAACCTCG ACAACGCCCT AGAGCTGTTG GTCAACTCGG GCCGGACCCC ACAGGAAGCG
CTGATGGTGA TGGTGCCAGA AGCCTACCAG AATCAGCCAG CCTTGGCCGA TCATCCGGAA
ATCGTCGACT TCTACGAGTT CTATAGCGGT TTGCAAGAGC CCTGGGATGG TCCGGCGTTG
TTGGTGTTCA GCGATGGCAA AAAGGTTGGA GCTTGCCTCG ATCGCAATGG TCTCCGTCCC
GCCCGCTACA GCATCACCGC TGATGGTTAC ATTGTCTTCG CCTCAGAAGC CGGTGTTGTT
GACCTACCCG TTGAAACGAT CATCGAAAAA GGCCGTCTTG GTCCGGGCCA GATGATTGAA
GTCGATCTCG AAACCAAAGA GGTCATCAAA AACTGGGACA TCAAGAAGCG GATTGCTAGC
CAACAGCCCT ACGGTCAATG GCTGCAAGAG CGGCAGGTTT TGGAGAACAA AGACTTCGGG
AACGAGCAGC AACTCGGCGA CTTTGATCTG CTCCGCCTCC AGACCGGCTT TGGCTACACC
GCTGAAGACG TGGACATGGT GATTGAGGCC ATGGCCAGCG ACGGCAAAGA GCCGACCTTT
TGCATGGGTG ATGACATTCC CCTGGCTGTC CTGTCCAGCA AAGCGCGTCT GCTCTACGAC
TACTTCAAGC AGCGCTTCGC CCAGGTCACC AACCCCGCGA TCGACCCACT ACGGGAAAGT
TTGGTCATGT CCCTGAGCAT GACCCTCGGG GCCCGCGACA ACCTGCTGCA GGTCGGGCCT
GAGTCGGCAC GGCTGCTGAA GCTAGACTCG CCAGTCTTGA ATGAAGCGGA GCTAGAGCAA
GTCAAGCAGT CAACCCTCAA GGCGGCTGAA CTCTCGACTC TCTACGCGAT CGAGCAAGGC
CCGGATGGTC TGCAAGCGGC GATCGCAGCC CTTTGTCAGC AGGCTGAGCA AGCCGTCCAG
GCTGGTCATC AGATTCTGAT CCTCAGCGAT CGCACAGGGG CGGGCCTCGC GCCGCAGATC
AGCTATATTC CGCCGCTGCT GGCCGTGGGG GCTGTCCACC ATCATCTGAT TCGCCAAGGG
CTGCGCATGA AAGCCTCCTT GGTGGTCGAT ACCGCCCAAT GTTGGAGCAC GCACCACTTC
GCTTGCCTGA TTGGCTATGG CGCCAGTGCC GTCTGTCCAT GGCTGGCTTT GGAAACTGTG
CGCCACTGGT GGCATGCGCC TAAGACTCAA AGCTTGATGG AGCGCGGCAA GATTGCTCAA
GTCAGCTTGG CAGGGGCTCA GCAAAACTTC CGTAAGGCTG TCGAAGCAGG GCTGCTGAAA
ATCCTGTCCA AGATGGGGAT TTCGCTGCTA CCCAGCTATC ACGGTGCGCA GATCTTTGAA
GCAATTGGTC TGAGCATGGA AGTAGTCGAC CTCGCGTTCC GCGGCACGAC TTCGCGGTTG
GGTGGTCTGA CCTTGGCTGA CATCGCCCAC GAGGTGATGA GCTTCCATAC CCGTGCCTTC
CCCGAGTTGA ACCAGAAGAA ACTCGAGAAC TTTGGCTTCG TGCAGTACCG CCCCGGTGGT
GAGTACCACA TGAACAGCCC CGAGATGTCG AAAGCCCTGC ACAAGGCCGT GGCAGCAGGC
AAAAACTACG ACCACTTTGA GGTCTATCGC AAGTACCTGG AAGAGCGGCC GGTCACAGCG
TTGCGGGACT TGCTGCAATT CGTCAGCGAT CGCCCGGCCA TCTCACTGGA TGAGGTGGAA
TCGGTAGAAG CGATCGTGCA GCGTTTCTGC ACTGGTGGGA TGTCGCTGGG GGCACTATCG
CGGGAAGCCC ACGAAACCCT CGCGATCGCC ATGAACCGGC TGGGCGGTAA GTCCAACTCC
GGTGAAGGTG GCGAAGACCC CGTTCGCTAC AAAGTTCTGG GCGATGTTGA CGCAGAAGGG
AACTCCCCAA CCCTGCCGCA CCTGCATGGT CTGCGCAATG GCGACACTGC TAGCTCGGCC
ATCAAGCAAA TTGCTTCGGG TCGCTTTGGC GTCACGCCCG AGTACTTGAT GAGTGCTGAT
CAGCTCGAGA TCAAGGTCTC GCAGGGGGCG AAGCCGGGTG AAGGGGGACA ACTTCCGGGC
AAGAAAGTCA GCCCCTACAT TGCTTTCCTG CGCAACTCGA AGGCGGGTGT CTCGCTAATT
TCACCACCGC CTCACCACGA CATTTACTCG ATCGAAGATT TGGCTCAGCT GATCTTTGAC
CTGCATCAGA TCAATCCCAA GGCACAAGTC TCGGTCAAGC TGGTGGCGGA AATCGGGATC
GGAACCGTGG CCGCTGGGGT AGCTAAAGCG AATGCTGACA TCATCCAAGT TTCGGGCCAT
GACGGCGGTA CCGGTGCCTC ACCGCTGAGC TCGATCAAGC ATGCTGGCGG GCCTTGGGAG
CTGGGCCTGA CCGAAGTGCA TCGCGTCCTG ATGGAAAATC AGCTGCGGCA GCGGGTGTTG
CTGCGGGTCG ATGGCGGCCT CAAGACTGGT TGGGACGTCG TCATGGCGGC GCTGATGGGT
GCAGAAGAGT TTGGTTTTGG CTCGATCGCA ATGATTGCGG AAGGCTGCAT CATGGCACGG
GTCTGCCACA CCAATAACTG CCCTGTCGGT GTCGCAACGC AGCAAGAGCA ACTGCGCAAG
CGCTTCACTG GCATTCCAGA GCATGTCGTC AACTTCTTCA TCCTGATTGC CGAAGAAGTG
CGCAGCATCT TGGCGAAGTT GGGCTATCGC AGCCTGACGG AACTCACTGG TCGCACCGAT
CTACTAGCGC CACGTCCTGA TCTGAAGCTG ACCAAGACGG CGGCTCTGAA TCTCGACTGC
CTGATCAAGC TGCCCGATAC GCGCTCCGAT CGCAGCTGGC TGGTTCATGA CGAAGTTCAT
GACAATGGCC CAGTGCTGGA CGACCAGTTG CTTGCCAACC CAGCCCTCAC CGCCGCGATC
GCCAATCAAG ATTCTGTTGC GATCGAGCAA GCGATCGTCA ACACGGATCG TTCTGTTGGG
GCTCGTCTCG CGGGTGCGAT CGCGCAGCGC TACGGCAACT ACGGCTTTGA AGGACAGATC
AGCCTGAACT TCAACGGCAG TGCTGGCCAG AGCTTTGGCG CTTTCAATAT CAGCGGCGTA
AGCCTCAACC TCGTGGGCGA AGCCAATGAC TACGTCGGCA AAGGCATGAA CGGTGGTGAA
ATCATCGTTC GACCAGAAGC AGGCGTCCGC TTTGATCCCT CCCAGAGCAG TATTGTCGGC
AACACCTGTC TCTATGGCGC AACGGGCGGT AGTCTGTTTG CCAATGGTCG GGCTGGTGAG
CGATTCGGGG TTCGTAACTC CAAGGCGCAA GCGGTTGTAG AAGGTACCGG CGATCACTGT
TGCGAATACA TGACGGGCGG TACGATTGTG GTCCTAGGCC CCTGCGGGCG TAACGTGGGT
GCTGGTATGA CCGGTGGTCT GGCCTACTTC CTCGATGAAG ATGGGCAGTT CCCCGCTAAG
GTCAATCCTG AGATCGTCAA GCTGCAACGT GTCTCAACTT CTGCTGGTGA GCAGCAACTT
AAACAGCTGA TCACGGCCCA CGCCGAGAAG ACAGGTAGCC CGAAGGCCTG CCATATCCTG
GAGCAGTGGG AGCAGTACTT GCCTCAGTTC TGGCAAGTGG TGCCGCCTTC GGAAGCAGAC
ACGCCGGAGG TCAACCCTGA AGTGGCTGAT AAACAACTAA CTGCTGTCTA G
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| Protein sequence | MNQHSVHSSS HPTYQGPRWL VEERDACGVG FVADQQGRAS HDLVEKSLRA LGCMEHRGGC
SADSDSGDGA GLMTAIPTDL LKTWLGAAAP ADLSSVGLGM VFLPQHGAEA TIARQLIEQI
VAEENLQFLG WRLVPTRPEV LGQQARANLP RIEQCFIASE QLRDDEFERQ LYLVRKRVET
AVKKALGTAS EDFYICSLSS RTVVYKGMVR SEVLGQFYTD LTNPAYTSNF GVYHRRFSTN
TMPKWPLAQP MRFLGHNGEI NTLLGNINWM MARQADLQHP AWGDRIGDLL PVVDLNRSDS
ANLDNALELL VNSGRTPQEA LMVMVPEAYQ NQPALADHPE IVDFYEFYSG LQEPWDGPAL
LVFSDGKKVG ACLDRNGLRP ARYSITADGY IVFASEAGVV DLPVETIIEK GRLGPGQMIE
VDLETKEVIK NWDIKKRIAS QQPYGQWLQE RQVLENKDFG NEQQLGDFDL LRLQTGFGYT
AEDVDMVIEA MASDGKEPTF CMGDDIPLAV LSSKARLLYD YFKQRFAQVT NPAIDPLRES
LVMSLSMTLG ARDNLLQVGP ESARLLKLDS PVLNEAELEQ VKQSTLKAAE LSTLYAIEQG
PDGLQAAIAA LCQQAEQAVQ AGHQILILSD RTGAGLAPQI SYIPPLLAVG AVHHHLIRQG
LRMKASLVVD TAQCWSTHHF ACLIGYGASA VCPWLALETV RHWWHAPKTQ SLMERGKIAQ
VSLAGAQQNF RKAVEAGLLK ILSKMGISLL PSYHGAQIFE AIGLSMEVVD LAFRGTTSRL
GGLTLADIAH EVMSFHTRAF PELNQKKLEN FGFVQYRPGG EYHMNSPEMS KALHKAVAAG
KNYDHFEVYR KYLEERPVTA LRDLLQFVSD RPAISLDEVE SVEAIVQRFC TGGMSLGALS
REAHETLAIA MNRLGGKSNS GEGGEDPVRY KVLGDVDAEG NSPTLPHLHG LRNGDTASSA
IKQIASGRFG VTPEYLMSAD QLEIKVSQGA KPGEGGQLPG KKVSPYIAFL RNSKAGVSLI
SPPPHHDIYS IEDLAQLIFD LHQINPKAQV SVKLVAEIGI GTVAAGVAKA NADIIQVSGH
DGGTGASPLS SIKHAGGPWE LGLTEVHRVL MENQLRQRVL LRVDGGLKTG WDVVMAALMG
AEEFGFGSIA MIAEGCIMAR VCHTNNCPVG VATQQEQLRK RFTGIPEHVV NFFILIAEEV
RSILAKLGYR SLTELTGRTD LLAPRPDLKL TKTAALNLDC LIKLPDTRSD RSWLVHDEVH
DNGPVLDDQL LANPALTAAI ANQDSVAIEQ AIVNTDRSVG ARLAGAIAQR YGNYGFEGQI
SLNFNGSAGQ SFGAFNISGV SLNLVGEAND YVGKGMNGGE IIVRPEAGVR FDPSQSSIVG
NTCLYGATGG SLFANGRAGE RFGVRNSKAQ AVVEGTGDHC CEYMTGGTIV VLGPCGRNVG
AGMTGGLAYF LDEDGQFPAK VNPEIVKLQR VSTSAGEQQL KQLITAHAEK TGSPKACHIL
EQWEQYLPQF WQVVPPSEAD TPEVNPEVAD KQLTAV
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