Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_0869 |
Symbol | |
ID | 3774046 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | + |
Start bp | 871262 |
End bp | 871852 |
Gene Length | 591 bp |
Protein Length | 196 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 637799285 |
Product | hypothetical protein |
Protein accession | YP_399886 |
Protein GI | 81299678 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1555] DNA uptake protein and related DNA-binding proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000000000000493602 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.0426802 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAGGCGA TCGCAGCTTG GTTCAAACCC CTGCAACAGT GGGCGACCAG TCAGCGCGAT CGCCCTTCTC CGGCTTGGCG ACAACTGCAA CAAATCCTGC AGCAACGCTT GCAGCAAAAC CCGAATTATC GCTTTCAGAA TGCGCTGGAA GTGGAAGTGG CCGCGAGTTT AGGTCTGCGG TTAGATGTTA ACTGTGCGGC TGTTGAAGAC TGGCTAAGGC TACCTGAGAT TACACCTAGG CAAGCAACAA CTTTGGTGCA GCTACGGCAG CAAGGCTTCT TCTTTGCGGA TCTGGACGAT GTGGCTCAGG CCTTGGGATT AGACGTTAGC CAATTACAAG CGATCGCGCC GATTCTGGTG TTTCGCTATT ACGAAGCAGA ACCTGAAGTT GCGATCGTTC CTTGTTGGGT GAATCGAGCC AAATATCCTG AAATTCTAGA GACTCTACCA GGGGTGAATG AAGCGATCGC CCGTGAGATT ATTCATCAGC GTTTGCTGCG CGGTCCCTAT CGAGATATCG CTGATTTTCA GCGACGGCTA CAACTATCTC CAGAAGCGAT CGCCCAGTGG CTACCTTGTC TCCGCTTCTG A
|
Protein sequence | MEAIAAWFKP LQQWATSQRD RPSPAWRQLQ QILQQRLQQN PNYRFQNALE VEVAASLGLR LDVNCAAVED WLRLPEITPR QATTLVQLRQ QGFFFADLDD VAQALGLDVS QLQAIAPILV FRYYEAEPEV AIVPCWVNRA KYPEILETLP GVNEAIAREI IHQRLLRGPY RDIADFQRRL QLSPEAIAQW LPCLRF
|
| |