Gene Synpcc7942_0856 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0856 
Symbol 
ID3774033 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp854933 
End bp855295 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content47% 
IMG OID637799272 
Productresponse regulator receiver domain-containing protein 
Protein accessionYP_399873 
Protein GI81299665 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.0758877 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.0586548 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTACAG TACTTGTTGT AGAAGACACC GCTTCTGAAA TGGAGCTAAT CACCACCTAC 
TTGCGAAATA GCGGTTACAC AGTCATCGGG GCTGCTGATG CCAAAGAAGC ACTGAACAAG
GTGAGCCAGT TTAAGCCTGA TGTTGTTGTG ACTGATGTGG TCATGCCTGG CATGAGTGGC
TTTGAATTGT GCCGGAGCCT CAAGAAAAAT CCCGAGACAG AAAAGCTACC TGTCATTGTC
TGCAGTTCCA AAAATCAAGA GATTGATCGC CTCTGGGCGA TGAAACAGGG GGCTGATGCT
TACGTCATTA AGCCTTTCCA ACAGGAAGAT TTAGTAAAGG CTGTTCGCTC AGTTGACTTC
TAG
 
Protein sequence
MSTVLVVEDT ASEMELITTY LRNSGYTVIG AADAKEALNK VSQFKPDVVV TDVVMPGMSG 
FELCRSLKKN PETEKLPVIV CSSKNQEIDR LWAMKQGADA YVIKPFQQED LVKAVRSVDF