Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_0854 |
Symbol | |
ID | 3774031 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | + |
Start bp | 850233 |
End bp | 852629 |
Gene Length | 2397 bp |
Protein Length | 798 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637799270 |
Product | hypothetical protein |
Protein accession | YP_399871 |
Protein GI | 81299663 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG4354] Predicted bile acid beta-glucosidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.50872 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.00887321 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGACCTATG AACTGCCCGC TGCTGCCTGG CGCCGACCCC TTGGTCTGGG CTGGGAAAAA CCGTATACCG TTCGCTACGC CAGCAATCTG GATGATGGGC CTTGGCATGG TGCGCCGCTG GGCGGATTTG GTGCGGGTTG TTGGGGGCGA TCGCCGCGCG GCGACGTCAC GCTCTGGCAT TTAGACGGCG GCGAGCATTG GTATGGCAGC ATTCCTGCCT GTCAGTTCGC GGTCTATGAA AGTGGCACGG GTGCCTACGC GCTCAGTACC GAAGCGCCGA GCGATGGCAG CCTCAGTAGT TGGAACTGGT ATCCCGCCAG CACGGCAGAG CGATCGACCG GAGAATACAG CGCCCTCTAC CCACGCAGCC AGTTCAGCTA TCAGCAGGTG TTTGAGGCAG AGATTCACTG CCGCCAGTTC TCGCCAATTC TGCCCCACGA CTATCAGGCG ACCAGCTATC CGACCGCAAT TTTTCGTTGG CAGCTCCACA ACCCCAGCGA TCGCCCCCTG ACGATCAGCA TTCTGCTGAG CTGGGAAAAT CTTTGTGGCT GGTTCACCAA CACTAACAAA GCGCCGGAAG TCGTCTACCG GGATGATGGT AGCCCTGTCT ATGACTACGT TCCCGCGTTA GGCCAGAGTG TAGGCAATCT CAATCAGCGG ATTGCAGGCG AAGGCTGGCA GGGGCTGCTG CTGGATCAAA CGCGATCGCA AGATCCTGAG GAAGGGGATG GGCAATGGGC GATCGCCATT GCTGAGGCAG AAGGACTGGA GATTTTCCGC TGCGATCGCT GGGATCCGAC AGGTGACGGA TCGGAGTTGT GGCAATCCTT TGCGCTGGAT GGCTCAATTC CAGATCGCCA GGATTCTCAG CCGGCAGCAG CGGGTGAGCG ATTGGCGGGT GCGATCGCTG TTCGGCTGAC GCTACAGCCG GGCGAAAGCC GCGAAATTCC CTTCAGCATC GCTTGGGACC TGCCGGTCAC TGAATTTGCG GCAGGTGTGA AAGCCTTCCG GCGCTATACC GACTTCTTTG GGCGTGACGG TCGTAATGCG GCCGCGATCG CCGCCACGGG GCTGAAGCAC TACGACGAGT GGGAACAGGC GATCGCTGCT TGGCAACAAC CGATTCTCGA TCGCGATGAC CTCTCCGATA CTTTCAAGCT GGGACTGTTC AACGAACTCT ATGACCTCTG TAGTGGCGGC AGTTTGTGGA CAGCAGCCAG CGAAGCCGAT CCAGTCGGGC AGTTCGCTGT TTTGGAATGC CTGGATTACG CCTGGTACGA GAGTTTGGAT GTGCGGCTCT ACGGCGCTTT TGGGCTGCTG ATGCTCTGGC CAGAGCTAGA AAAAGCGGTG ATGCGAGCCT TTGCGCGGGC GATTCCCCAA GCTGACGATC GCACGCGGGT GATTGGCTAC TGGTTCACGA TTGGCCAAGA AAGTCCGCTA GCGAAACGCA AGTTGGCGAA TGCGACGCCC CATGACTTAG GCGCACCGAA TGAGTCGCCA TGGTTGCAGA CCAACTACAC CGGCTATCAA GATTGCAACC TTTGGAAGGA TTTGGGCTGT GATTTTGTCC TGCAGGTCTG GCGTGATTAT CAACTGACTG GTTCGAGCGA TCGTGGGTTC CTGTCGGACT GCTGGCCAGC TGCCGTAGCG GCACTGCGCT ATCTCAAGGA CTTTGATCTG GATGGTGATG GCATTCCCGA GAATAGCGGT GCGCCGGATC AAACTTTTGA TGATTGGCGC TTGCAAGGCA TTAGTGCCTA CTGCGGTGGG CTCTGGATTG CAGCGCTGGA GGCTGCTCTC GCGATCGCTG ATGTTTTGGA GTTGTCAGCA GAAGACCGCG ATCGCCAAGA CTTCCAATCC TGGCTAGCAC AGGCGCGATC GCTCTATCAC GACACCCTTT GGAATGGCCG CTATTACCAA CTCGATAGCG GCAGCGGTAG CCAAGTCGTG ATGGCGGATC AACTCTGCGG TGACTTTTAT AGTCGGCTAT TGCAGTTACC GCCGGTCGCT CCGCTGGAAG CCGCGCAATC CACAGCTGAT ATGGTCTATG AGGCTTGCTT CCAGAAGTTT CATAGCGGTC AATTTGGTTT AGCCAATGGC CTGCTGCCAG ATGGTTCGCC AGTAGATCCC AAGGGTACGC ACCCGCTGGA AGTGTGGACA GGAATTAACT TTGGCATTGC TGCCTATTGG TTGCTGCTAG GTCACCGCGA TCGCTGTTTT GAAGTGACAG AGACGGTCAT TCGCCAAATT TATGACAACG GCTTACAGTT TCGTACGCCG GAAGCGATCA CTGCCAATGC AACGTTTCGC GCTAGCCACT ATCTCCGGCC AATGGCAATT TGGGCAGTTT ATGGTGTGCT AACTAACTTT TCTCCAGTTG ATCAACAACC CGTCTAG
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Protein sequence | MTYELPAAAW RRPLGLGWEK PYTVRYASNL DDGPWHGAPL GGFGAGCWGR SPRGDVTLWH LDGGEHWYGS IPACQFAVYE SGTGAYALST EAPSDGSLSS WNWYPASTAE RSTGEYSALY PRSQFSYQQV FEAEIHCRQF SPILPHDYQA TSYPTAIFRW QLHNPSDRPL TISILLSWEN LCGWFTNTNK APEVVYRDDG SPVYDYVPAL GQSVGNLNQR IAGEGWQGLL LDQTRSQDPE EGDGQWAIAI AEAEGLEIFR CDRWDPTGDG SELWQSFALD GSIPDRQDSQ PAAAGERLAG AIAVRLTLQP GESREIPFSI AWDLPVTEFA AGVKAFRRYT DFFGRDGRNA AAIAATGLKH YDEWEQAIAA WQQPILDRDD LSDTFKLGLF NELYDLCSGG SLWTAASEAD PVGQFAVLEC LDYAWYESLD VRLYGAFGLL MLWPELEKAV MRAFARAIPQ ADDRTRVIGY WFTIGQESPL AKRKLANATP HDLGAPNESP WLQTNYTGYQ DCNLWKDLGC DFVLQVWRDY QLTGSSDRGF LSDCWPAAVA ALRYLKDFDL DGDGIPENSG APDQTFDDWR LQGISAYCGG LWIAALEAAL AIADVLELSA EDRDRQDFQS WLAQARSLYH DTLWNGRYYQ LDSGSGSQVV MADQLCGDFY SRLLQLPPVA PLEAAQSTAD MVYEACFQKF HSGQFGLANG LLPDGSPVDP KGTHPLEVWT GINFGIAAYW LLLGHRDRCF EVTETVIRQI YDNGLQFRTP EAITANATFR ASHYLRPMAI WAVYGVLTNF SPVDQQPV
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