Gene Synpcc7942_0849 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0849 
Symbol 
ID3774026 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp845822 
End bp846433 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content56% 
IMG OID637799265 
Producthypothetical protein 
Protein accessionYP_399867 
Protein GI81299659 
COG category[S] Function unknown 
COG ID[COG1981] Predicted membrane protein 
TIGRFAM ID[TIGR00701] conserved hypothetical integral membrane protein 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0214356 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCGCTCTC TTGAGGCCGA TCGCGTGGCC TACTACTGGT TCAAGGCATT TCACATCGTT 
GGTGTTGTGG TCTGGTTCGC CGGGTTGTTT TATCTGGTGC GCCTGTTCAT CTACCACGTC
GAAGCAAACG ACAAGCCAGA ACCGGCACGG ACCATTCTGC AAGAGCAGTA TGGCCTTATG
GAGAAACGCC TGCTCAACAT CATCACCACC CCCGGCATGC TGGTAACGGT CAGTATGGCG
ATCGCCCTAC TCGTCACCCA GCCGGACTAC CTGCATCAGG GCTGGATGCA CGCCAAATTA
GCCTTTGTAG CCGTATTGCT GGGCTATCAC CACTACTGCG CTCGTCTGCT CAAGAAACTC
CAAGCTGGCA CCTGCCAATG GACCGGTCAG CAGCTACGTG CCCTCAATGA AGCGCCAACA
TTGTTGCTGG TGCTGATTGT CATGTTGGTG ATTTTCAAAA ACCAATTCCC CACCAGCGCT
TCCGTTTGGC TGATCGTGGG TTTAGTGGTC ACGATGCTGG CGACGATTCA ACTCTACGCC
CGCAAGCGTC GTCTCGATCG CGAACGGCAA GAAGCAGCCG CTTCTCTGGA AGCAGCGCCC
ACCCAGTCCT AA
 
Protein sequence
MRSLEADRVA YYWFKAFHIV GVVVWFAGLF YLVRLFIYHV EANDKPEPAR TILQEQYGLM 
EKRLLNIITT PGMLVTVSMA IALLVTQPDY LHQGWMHAKL AFVAVLLGYH HYCARLLKKL
QAGTCQWTGQ QLRALNEAPT LLLVLIVMLV IFKNQFPTSA SVWLIVGLVV TMLATIQLYA
RKRRLDRERQ EAAASLEAAP TQS