Gene Synpcc7942_0812 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0812 
Symbol 
ID3775990 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp806893 
End bp807813 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content57% 
IMG OID637799229 
Productheat shock protein DnaJ-like 
Protein accessionYP_399831 
Protein GI81299623 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.638121 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTCTCC GCCTCGATAA GGGGCTGTTT CAGCTCGACG ACTTCAACGA CTATCACGCT 
ATTTTGGGCG TCTCTGTCGA TGCGACACCC GAACAAATTC GTCGTCAGTA CCTCCAAATT
GTGCGTCGGC TTCACCCTGA TCGCTTGCAG GGCGATCGGC AACAGCTGCG AGACACCAGT
ACCCTCGTGC TTGCCAGAGT TGTCAACCCG GCTTACAACG CCTTATCACA GCCGCAGCGC
TATCAAGATC ACCTCCTGGT ATTACAAGCC AAAGCGCAGC AGGCCCGAGC GCGCCAAATC
TCGATTCGAG CCATGCATGA GGCTGCTCAA AAGCTGGCCA TCAGTCCTCA AATTCGTGCC
GACTATCAAG CTCTTGTTCA GCAACTCTCG ACCGATCTCT ACAGCTCGCT CTCGGAAATT
GAAGAACGCA TTAACCAGCT GAGCGAGCTC AACCTTGTCT ATCTGCAGCG CAATCCGGGC
GTGGCTGAAA CAATGCCGAT GGCTAAGGTT ACAGTCACCC CAGTTCCTGC TGCTGCGACA
GCTGCGACTC AAGGGGAAGC GGCTCCTGTC GCAACTGGAG CCACGAGTAC ATCTGAGCGG
GTTGCCAGTT ACCTACGACG GGCTGAGGAC TACGTCAGCA AGCAAGCCTT TGCTCCGGCG
ATCGCGGAAC TGCGGGATGC CCTCCGTCTC GATGCCAACG ATAGCCGCTG CCATGCCTTG
ATGGGGTCCA TCTATTTGCA GCAAAATCAA CTGACCATGG CTCGGGTTTC AATTCGCAGG
GCTCTGGCGC TGGATCCTCA AAATGCTCAA GCCCTTGAGG CCCAACGGCA ACTCGCCCAG
CAAGACGCCA AGGCTGCGCC GCCGCCACCG CCCAAAGGCA AGCGAGGGCT GCTCGGCGGT
TGGTTTAGCA AGAACAAGTA A
 
Protein sequence
MVLRLDKGLF QLDDFNDYHA ILGVSVDATP EQIRRQYLQI VRRLHPDRLQ GDRQQLRDTS 
TLVLARVVNP AYNALSQPQR YQDHLLVLQA KAQQARARQI SIRAMHEAAQ KLAISPQIRA
DYQALVQQLS TDLYSSLSEI EERINQLSEL NLVYLQRNPG VAETMPMAKV TVTPVPAAAT
AATQGEAAPV ATGATSTSER VASYLRRAED YVSKQAFAPA IAELRDALRL DANDSRCHAL
MGSIYLQQNQ LTMARVSIRR ALALDPQNAQ ALEAQRQLAQ QDAKAAPPPP PKGKRGLLGG
WFSKNK