Gene Synpcc7942_0796 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0796 
Symbol 
ID3775973 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp791175 
End bp791720 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content61% 
IMG OID637799212 
Producthypothetical protein 
Protein accessionYP_399815 
Protein GI81299607 
COG category[R] General function prediction only 
COG ID[COG5512] Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACCCC GATCGCTCGA ACAGCTGCTC CGGCAGTTAC AGCAAGATCC GCGCTGGCAG 
CAAGATCGCA CCCTGCGCCA AATTCAACAG CGCTGGTCTG GTCTGGTGGG GCCGGCGATC
GCTGCACAAG CTGAACCTGT CGCAATTCAG CGGCAAACCC TGCAAGTTGC CGTGAGTTCA
GGGGCTTGGG CTCAAACCCT CAGCTTTGAA CGCCTCCGGC TGCTGCAGCG CCTGCGTCAG
GAATTGAAGA TTAAACCGCA GGAAATTAAG GACATCCGCT TTTCAACGGC CTATCGTGAT
CGCCGCACAG TGACGGCCCC CCTCGAATCC GATCGCCAGC AGCAATCCTG GCAAGCTCAT
CCCTGCCGCT TGGGCGAGAC GCTGAACCCA GCGATCGCCA GTGATCCACT GCAGCGACGC
CGAGACCTCA GCCGTCGCTT ACCACGCTGT CCACGCTGTG GCATTCCCAC CCCACCGGGA
GAATTGCAAC GCTGGCGCTG CTGTGCACTC TGCATTCGCC AACAGTGGTC GTCCCCCACG
GGCTAG
 
Protein sequence
MQPRSLEQLL RQLQQDPRWQ QDRTLRQIQQ RWSGLVGPAI AAQAEPVAIQ RQTLQVAVSS 
GAWAQTLSFE RLRLLQRLRQ ELKIKPQEIK DIRFSTAYRD RRTVTAPLES DRQQQSWQAH
PCRLGETLNP AIASDPLQRR RDLSRRLPRC PRCGIPTPPG ELQRWRCCAL CIRQQWSSPT
G