| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_0785 |
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| Symbol | |
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| ID | 3775962 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | + |
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| Start bp | 779781 |
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| End bp | 781919 |
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| Gene Length | 2139 bp |
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| Protein Length | 712 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637799201 |
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| Product | penicillin-binding protein 1A |
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| Protein accession | YP_399804 |
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| Protein GI | 81299596 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
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| TIGRFAM ID | [TIGR02074] penicillin-binding protein, 1A family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.649225 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCGCTGG GGCTGAAATC GCGCGGCGGC GATGGATTCA GCAGCTCCCT AATCCCAAAG
AGGTCTAGCT TCACGCGACC GGGCACGATC ACCATTCTCT CGGCCGACAA TACCGTTCTG
CAGAAAATTG GGCCGGCCAC GCGCGACAAG GTGCCCTTCA AGCAGATTCC CCTGCGTCTA
CGTCAGGCTT TCCTCGCGGC TGAGGATCGG CGCTTCTACG AACATAGCGG TATCGATCTG
TTCGGGATTG CCCGCGCCAG CGTCACAAAC CTGCTCAGCG GTCAGGTGCA GGAGGGTGCT
AGTACCATCA CCCAGCAGCT GGCCCGCATT GTTTTTCTCA GCCAAGAGCG CAGTCTGCAA
CGCAAGCTCA ACGAAGCGCT GATGGCGCAA AAGCTAGAGC AGGAGTTGAC CAAGGACCAA
ATCCTTGAGC AGTATCTCAA TTTGGTCTAT CTCGGGGCAG GGGCCTACGG GGTTGCTGAT
GCTGCTTGGA CTTACTTCAG CAAGCCAGTC CAAGACCTCA GCCTAGGAGA AATGGCAACG
CTGGCGGGGC TACCCCCCGC GCCCACAGCC TACTCGCCTT TGGTCTCCTT GGAAGTGGCT
CAAGAGCGGC GTAATAGTGT GCTGAGCCGC ATGCAAGAGG TGGGCTTCAT CACCCCATCT
GAGGCAGAAG CTGCTCGCCG CGAACCCCTT GCGCTCAAGC CTGCAGCACC GAAATATGCT
CAAAGTCTGG CGCCCTACTT TACCGACTAC GTTCGCCAGG AACTGCCACG CTTTGTTGCG
CCGGATGTCT TGGAGTACGG CGGCCTGACG CTCAAGACGA CCTTGAACTA TCGCTGGCAA
CAAGCGGCGG ACCAGGCTAT CCAAAACTCG ACCTACGGCA GTTTGCAGGG GGCTCTCGTC
AGTATCGATC CTCGCGATGG GGCAATTCGG GCGATGGTGG GCGGGGTGGA TTTCAATCGC
AGCCAGTTCA ACCGCGCGAC CCAGGCCTAT CGTCAGCCGG GTTCCACTTT CAAGATGTTT
GTCTATGCGG CGGCGATCGC TTCAGGAATG TCGCCCTCCC AGGTCTACTT GGATGCCGCG
ATCAATTTGG GGGGCTATAA ACCGCAAAAC TTTAGCCGTA GCTTTAGTGG CTCGATCAGT
CTGACCCAAG CGTTGACTAA TTCCGTCAAT ATTGTCGCGA TCAAGGTGCT GCGGGATGTT
GGCATTGACA ATGTCATTCG GGTGGCCCGC CAAATGGGAA TTCGGGCGGA CTTGGCGCGC
TACTATCCCT TGGCATTAGG AGCCTCAGAC GTCACGCTGC TGGAGATCAC CAGTGCTTAC
GGCACTCTGG CCAATCAGGG GAAATATCTG ACACCCCACC CGATCGCTGA AATCATCGAT
CATCGCGGTC GAGTCCTCTA CCAAGACAAA CAGATCAAGC CAGTGCAAGC CCTCGATCCT
GGGTCTGCTG CGATCGTGAC ATCCATGCTG GAGCGCGTTG TCACCTCTGG AACGGGGGCT
GCTGCTTACC TGCCCGATCG CGCAGTGGCA GGGAAAACAG GCACGACCGA ACAAGCTCGC
GACCTCTGGT TTATTGGCTA CATCCCGCAG TTGGTGACCG GGGTTTGGCT GGGCTACGAC
AACTTTGCCC CGACTGGCAG TGGGAGTAGT GCAGCTGCGG TGGCTTGGTA TCGCTTTATG
GTCGAGGCCA TTAAAGACCT GCCCCCCGAA AAATTTCCGC CGCTGCCGAA CCCCGATCAA
CGGAAACCGC TCTTTAAAGC TCAGTTCACA AGTGGCAGTG ACCTAGGGGG GATCGATCGT
GGACCCGGCC GCTATGACTA CGGCGCTGGC ATTGAGTTGG CGGACTCCCC CAGTTTTGCT
GGCAGTCTGC CCGCCGCACC AGCCTCCAAT GCTGGCTCGA GCCGTTCCCG CGATCCCGAA
CCGGAATATA GCAGTGAGCC GGCGGCGGAA GAACCCCGCT ACGAAGATGC TCCCCCTGAG
GCACCGGCTG AATCTTTTGA GCCGGGACCC AGTGCCGTCG AAGCAGAACC CGCTCCCCCA
GCACCCGTTG AACCGCAGGC ACCGGTGCCC CCTCCACCTG AACCCACTGC ACCACCCCTC
CCCGTGGAGC CTACGGCACC TCAGCCTCAG GCCCCCTAG
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| Protein sequence | MSLGLKSRGG DGFSSSLIPK RSSFTRPGTI TILSADNTVL QKIGPATRDK VPFKQIPLRL
RQAFLAAEDR RFYEHSGIDL FGIARASVTN LLSGQVQEGA STITQQLARI VFLSQERSLQ
RKLNEALMAQ KLEQELTKDQ ILEQYLNLVY LGAGAYGVAD AAWTYFSKPV QDLSLGEMAT
LAGLPPAPTA YSPLVSLEVA QERRNSVLSR MQEVGFITPS EAEAARREPL ALKPAAPKYA
QSLAPYFTDY VRQELPRFVA PDVLEYGGLT LKTTLNYRWQ QAADQAIQNS TYGSLQGALV
SIDPRDGAIR AMVGGVDFNR SQFNRATQAY RQPGSTFKMF VYAAAIASGM SPSQVYLDAA
INLGGYKPQN FSRSFSGSIS LTQALTNSVN IVAIKVLRDV GIDNVIRVAR QMGIRADLAR
YYPLALGASD VTLLEITSAY GTLANQGKYL TPHPIAEIID HRGRVLYQDK QIKPVQALDP
GSAAIVTSML ERVVTSGTGA AAYLPDRAVA GKTGTTEQAR DLWFIGYIPQ LVTGVWLGYD
NFAPTGSGSS AAAVAWYRFM VEAIKDLPPE KFPPLPNPDQ RKPLFKAQFT SGSDLGGIDR
GPGRYDYGAG IELADSPSFA GSLPAAPASN AGSSRSRDPE PEYSSEPAAE EPRYEDAPPE
APAESFEPGP SAVEAEPAPP APVEPQAPVP PPPEPTAPPL PVEPTAPQPQ AP
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