Gene Synpcc7942_0704 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0704 
Symbol 
ID3775874 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp695313 
End bp695948 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content45% 
IMG OID637799116 
Productchloramphenicol O-acetyltransferase 
Protein accessionYP_399723 
Protein GI81299515 
COG category[R] General function prediction only 
COG ID[COG0110] Acetyltransferase (isoleucine patch superfamily) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.191265 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.790707 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTATC CCAGTCCTCA CAATAAGCAT CCTTTGCCAG ATTTTCTGCA GGTCTGCTTC 
ATCAAGAATA CGGTGAAAAA TCCCAATATT CTGATTGGGG ATTACACCTA TTACGATGAT
CCTGAAGATT CTGAGAACTT TGAGCGTAAT GTGCTTTATC ACTTTCCCTT TGTCGGCGAT
AAGCTGATCA TCGGTAAGTT TTGTGCGATC GCTCGAGGTG TGAAATTCAT CATGAATGGT
GCGGCTCACA AGATGTCGGG CTTTTCAACC TATCCCTTTG AGATCTTTGG GCCGAGCTGG
GATCGCGTTA TGCCTCAGCC GGGCGACTAT CCTTATAAAG GTGATACCGT CATTGGTAAT
GATGTTTGGA TTGGTTATGA AACGCTAATT TTGCCAGGTG TGAAAATCGG TCACGGTGCG
ATTATCGGAG CGCGATCGCT CGTTACTAAA GATGTGCCAC CCTATGGGAT TGTTGGGGGA
AATCCCGCAG ATGTTTTGAA GATGCGTTTT TCAGAGCCTG TCATCGAAGC CTTGTTAGAA
ATTGCTTGGT GGGATTGGCC AGTTGAGAAA ATTACTGAGA ATCTAGAAGC GATCGTGGGT
GCAGATTTGG ATGTTCTGAA AAATGTCAGC AGTTGA
 
Protein sequence
MTYPSPHNKH PLPDFLQVCF IKNTVKNPNI LIGDYTYYDD PEDSENFERN VLYHFPFVGD 
KLIIGKFCAI ARGVKFIMNG AAHKMSGFST YPFEIFGPSW DRVMPQPGDY PYKGDTVIGN
DVWIGYETLI LPGVKIGHGA IIGARSLVTK DVPPYGIVGG NPADVLKMRF SEPVIEALLE
IAWWDWPVEK ITENLEAIVG ADLDVLKNVS S