Gene Synpcc7942_0701 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0701 
Symbol 
ID3775871 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp692799 
End bp693260 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content58% 
IMG OID637799113 
Producthypothetical protein 
Protein accessionYP_399720 
Protein GI81299512 
COG category[R] General function prediction only 
COG ID[COG0824] Predicted thioesterase 
TIGRFAM ID[TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.00299166 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.252492 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGCTG ACATAAATCT TGAAAATGTA GCACCGCCTT GGTTTGACTA TCCCTTGCGG 
GTCCAGCCCC ATCACACCGA CTATGCAGGC ATTGTCTGGC ATGGCACCTA TCTGGCTTGG
CTAGAAGAGG CGCGAGTGGA ATGTCTGCGA TCGGTGGGCG TCGCCTTCTC AGATTTGGTG
GCCTTGGGCG TCGATTTACC CGTAGTAGAT CTTGGGGTTC GCTATCGCCG TGCGATCGCC
CTCGGTGAGT CTGTGCTGGT GCGGGTGCGC ACGGGCCCGA GTCAAGGTGT GCGGCTGGTC
TGGGATTGTC AGATCTGTCT GTCGCCCGAC CAAGTTTGCG CTACAGCACA GGTGATTTTG
GCTCCCGTCG ATCGCCAACG GGGACGAATT CTTCGGCAGC TCCCTGAACC ATTAGAGGCC
GCGATCGCGC GACTCCAAGC AGGGCAGTAC AGTCCCGAAT GA
 
Protein sequence
MSADINLENV APPWFDYPLR VQPHHTDYAG IVWHGTYLAW LEEARVECLR SVGVAFSDLV 
ALGVDLPVVD LGVRYRRAIA LGESVLVRVR TGPSQGVRLV WDCQICLSPD QVCATAQVIL
APVDRQRGRI LRQLPEPLEA AIARLQAGQY SPE