Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_0686 |
Symbol | |
ID | 3775856 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | + |
Start bp | 680978 |
End bp | 682138 |
Gene Length | 1161 bp |
Protein Length | 386 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637799098 |
Product | FO synthase subunit 2 |
Protein accession | YP_399705 |
Protein GI | 81299497 |
COG category | [H] Coenzyme transport and metabolism [R] General function prediction only |
COG ID | [COG1060] Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes |
TIGRFAM ID | [TIGR00423] radical SAM domain protein, CofH subfamily [TIGR03551] 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase, CofH subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATTGATT CGGCGACCGT CGCTGCCATC CTGGCGTCTG TTTTGGATGG CAAGCCTTTA GAACCGGAAG CCGCTACCGT TTTACTCAAA GCCCGCGATC GCTCGCTCCG TCAGCAAATT CAGGCAGCGG CGAACCAACT CCGTTCCCGA CAGGTGGGCG ATCGCGTCAG CTATGTGATC AATCGCAATC TCAATTTCAC CAATATTTGC GAGCAGCACT GTAACTTCTG CGCCTTTCGT CGTGATGCGG ATCAAGACGG TGCTTTCTGG CTAGATGCTT CAATTCTGCT TGAAAAAGGA GCGGCAGCCG TTGCCGCTGG TGCAACGGAA TTTTGTCTGC AGGGTGGCCT GAATCCAGCG GCAAAACGCA ACGGGCGATC GCTCGACTTT TATGTCGAGT TGACGGCCAG CCTTAAACAA GCCTTTCCGC AGATTCATCT CCATGCTTTT TCACCGCAAG AAATTCAGTT TATTGCTCGG GAGGATGGGC TGAGTTTTCG TGAGGTGTTG ATGGCTTTGC GATCGGCGGG GGTGGGCTCT TTGCCCGGCA CTGCAGCGGA AGTGTTGGAT GACTCGGTGC GACGGATTCT CTGTCCCGAA AAATTAGATA GTGCAACCTG GAAAACAATC ATCCAGACTG CGCACCAAGT TGGTTTGCCG ACGACTAGCA CGCTGCTCAG TGGTCATCTC GAAACGCCCA GTCAGCAGGC TCAGCATCTA GAACAACTGC GACAACTCCA ACAAGCTGCG ATCGCTGGCG AAACCCCAGC CCGGATCACG GAGTTCATTC TGCTGCCGTT TGTGGGGGAG CTGGCGCCGG CACCGCTGCG CAAGCGGGTC AAGCGCGATC AGCCTGATTT ATCCGATGCA CTGTTGGTGA TGGCTGTGGC CAGGCTGTAT CTGGGCGACT GGATTGCCAA TCACCAACCG AGTTGGGTCA AGCTGGGGTT GGCTGGAGCA ACCCAAGCCC TCGACTGGGG CTGCAATGAC TTGGGCGGCA CGTTGATGGA GGAGCACATT ACCAGCATGG CAGGGGCCCA GGGCGGAACG GCTCAAACCG TGGAACAGCT AGAGGCGGCG ATCGCAGCTG CGGGGCGCCA ACCTTACCAG CGCGATACGC TCTACCGGCC CGTGGCGGTG GAGGCTGTTC ATGCCGGTTA A
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Protein sequence | MIDSATVAAI LASVLDGKPL EPEAATVLLK ARDRSLRQQI QAAANQLRSR QVGDRVSYVI NRNLNFTNIC EQHCNFCAFR RDADQDGAFW LDASILLEKG AAAVAAGATE FCLQGGLNPA AKRNGRSLDF YVELTASLKQ AFPQIHLHAF SPQEIQFIAR EDGLSFREVL MALRSAGVGS LPGTAAEVLD DSVRRILCPE KLDSATWKTI IQTAHQVGLP TTSTLLSGHL ETPSQQAQHL EQLRQLQQAA IAGETPARIT EFILLPFVGE LAPAPLRKRV KRDQPDLSDA LLVMAVARLY LGDWIANHQP SWVKLGLAGA TQALDWGCND LGGTLMEEHI TSMAGAQGGT AQTVEQLEAA IAAAGRQPYQ RDTLYRPVAV EAVHAG
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