Gene Synpcc7942_0679 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0679 
Symbol 
ID3775662 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp673785 
End bp674108 
Gene Length324 bp 
Protein Length107 aa 
Translation table11 
GC content57% 
IMG OID637799091 
ProductRNA-binding region RNP-1 
Protein accessionYP_399698 
Protein GI81299490 
COG category[R] General function prediction only 
COG ID[COG0724] RNA-binding proteins (RRM domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTATTT ACGTTGGTAA CCTGTCCTAC GAGGTTACAG AAGCTGACTT GACCGCCGTA 
TTTACGGAGT ATGGTGCGGT CAAGCGAGTT CAACTGCCTA TCGATCGTGA AACCGGTCGG
ATGCGTGGTT TCGGTTTTGT CGAAATGAGC GCTGATGCAG AAGAAGATGC TGCGATTGCT
GCACTTGACG GAGCTGAGTG GATGGGCCGA GGCCTCCGCG TCAACAAAGC AAAGCCCCGT
GAGGAGCGCA GTGGTGGCGG CTCGTTCGGC GGTGGCGGTG GCCGTCGCGG TGGTGGCGGT
GGCGGTGGTT ACCGCAACTA CTAA
 
Protein sequence
MSIYVGNLSY EVTEADLTAV FTEYGAVKRV QLPIDRETGR MRGFGFVEMS ADAEEDAAIA 
ALDGAEWMGR GLRVNKAKPR EERSGGGSFG GGGGRRGGGG GGGYRNY