Gene Synpcc7942_0666 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0666 
Symbol 
ID3775649 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp663141 
End bp663761 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content60% 
IMG OID637799078 
Productheat shock protein DnaJ-like 
Protein accessionYP_399685 
Protein GI81299477 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0534028 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGCTG TCACCCAAGC CCGCTTGCTG CTGCAACTAC CACTGGATTT TGATGAAGCG 
CAACTCAAGC GCCACTATCG CCAGCGTGCC AAAGCGCTCC ATCCCGATCA CAACGACAGC
CCCGAGGCCC AAACTCAGTT TCAAGAACTG ACCCTTGCTT ACCAATGCCT CCAGCAATCG
CTCCGCGATC GCTCGGCTGC TGCGGCTGCA GATCCAGCGG CTGCTCCCGA GAATTCTGGT
GGCCCGAAGG TCACCGTGGT GCGGCGGCAA GCCTCGGCTC AGGCGGCTTC TAGTCCCCCA
CCCCCGCCGT TGACGCCCGA ACAGATGCTG CTGCGTCGGA ATGCCGAAGT GCAACTGGAA
GATTTGCGAC GACAGGGCAA ACTGGTGCAG GCCCTGCTGG TTGTTGATGC ACTACTCCAG
CAGTTGCCTA CCGATGCCCG TGCCCAGCAA CTCAAAGGCT GGGTTTACTA CGACTATGCA
CAACAACTCA TTGGTCAAAA CAAAGTCGAT CGCGCCCGCC AGTATCTCAA AGGCGCTCTG
AAGTGGGCGA AGGGTGATGC AGAGCTGTGG CGCCGCATTG AAGCCACCTA CACGCGGCTA
GAACGTCGGG GCCGTTCCTA G
 
Protein sequence
MDAVTQARLL LQLPLDFDEA QLKRHYRQRA KALHPDHNDS PEAQTQFQEL TLAYQCLQQS 
LRDRSAAAAA DPAAAPENSG GPKVTVVRRQ ASAQAASSPP PPPLTPEQML LRRNAEVQLE
DLRRQGKLVQ ALLVVDALLQ QLPTDARAQQ LKGWVYYDYA QQLIGQNKVD RARQYLKGAL
KWAKGDAELW RRIEATYTRL ERRGRS