Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_0666 |
Symbol | |
ID | 3775649 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | + |
Start bp | 663141 |
End bp | 663761 |
Gene Length | 621 bp |
Protein Length | 206 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637799078 |
Product | heat shock protein DnaJ-like |
Protein accession | YP_399685 |
Protein GI | 81299477 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.0534028 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATGCTG TCACCCAAGC CCGCTTGCTG CTGCAACTAC CACTGGATTT TGATGAAGCG CAACTCAAGC GCCACTATCG CCAGCGTGCC AAAGCGCTCC ATCCCGATCA CAACGACAGC CCCGAGGCCC AAACTCAGTT TCAAGAACTG ACCCTTGCTT ACCAATGCCT CCAGCAATCG CTCCGCGATC GCTCGGCTGC TGCGGCTGCA GATCCAGCGG CTGCTCCCGA GAATTCTGGT GGCCCGAAGG TCACCGTGGT GCGGCGGCAA GCCTCGGCTC AGGCGGCTTC TAGTCCCCCA CCCCCGCCGT TGACGCCCGA ACAGATGCTG CTGCGTCGGA ATGCCGAAGT GCAACTGGAA GATTTGCGAC GACAGGGCAA ACTGGTGCAG GCCCTGCTGG TTGTTGATGC ACTACTCCAG CAGTTGCCTA CCGATGCCCG TGCCCAGCAA CTCAAAGGCT GGGTTTACTA CGACTATGCA CAACAACTCA TTGGTCAAAA CAAAGTCGAT CGCGCCCGCC AGTATCTCAA AGGCGCTCTG AAGTGGGCGA AGGGTGATGC AGAGCTGTGG CGCCGCATTG AAGCCACCTA CACGCGGCTA GAACGTCGGG GCCGTTCCTA G
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Protein sequence | MDAVTQARLL LQLPLDFDEA QLKRHYRQRA KALHPDHNDS PEAQTQFQEL TLAYQCLQQS LRDRSAAAAA DPAAAPENSG GPKVTVVRRQ ASAQAASSPP PPPLTPEQML LRRNAEVQLE DLRRQGKLVQ ALLVVDALLQ QLPTDARAQQ LKGWVYYDYA QQLIGQNKVD RARQYLKGAL KWAKGDAELW RRIEATYTRL ERRGRS
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