Gene Synpcc7942_0653 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0653 
Symbol 
ID3775636 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp648710 
End bp649441 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content56% 
IMG OID637799065 
Productpeptidyl-prolyl cis-trans isomerase 
Protein accessionYP_399672 
Protein GI81299464 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGATCGC TGATCCAAGT TGCCGCCCAA GGACTCCTGA TCGGTCTGGT GGCCTGGGGC 
TTAGTTGCCT GCAGTGGCAG TACCACCTCC CTCTCTGCAG CCAATGCCAA TCCTGAGGAC
GTGGGACGCC TATACCCCGA CATCCCTCGT CTGGAGGGCA ATGCCACCGT TGTGCTGACG
GTCAATAATC AGCCGATCGA GATCGAAGTC CTTGGAAAAG ATGCGCCGCT TACCGCTGGC
AATTTTGTTG ACCTCGTCTC TAAAGGAGTT TACGACGGCA CCAGCTTTCA CCGCGTGGTG
AAAGAACCGC AGCCCTTTGT GGTTCAAGGT GGCGATCCAC AAAGCAAAGA TCCCAAAGTG
CCGGCCCAGC AACTGGGCAC TGGGTCCTAC CAAGATCCCA ATACGAAACA GCCACGCTAC
TTACCCTTAG AAATTACGCC TGAGGGCGCA AGCCAGCCGG TCTATAGCCG GACGCTGGAA
CAAGCGAGCG TTAGCCGGCC ACCAAAATTG CGGCATCAAC GCGGTGCGGT CGCCATGGCC
CGCGCATCCT TCCCTGATTC GGCATCTAGC CAGTTCTACA TCGCACTGTC GGATTTGGGC
TTTTTGGATG GAAACTATGC TGTCTTCGGC TATGTCCGCA GCGATATGAC GGTCGTCGAT
CGCATCAAAC AGGGCGATCG CATCCAATCA GCTAAGGTCA CAGCAGGTCT GGACAACCTC
AAACGCCCAT GA
 
Protein sequence
MRSLIQVAAQ GLLIGLVAWG LVACSGSTTS LSAANANPED VGRLYPDIPR LEGNATVVLT 
VNNQPIEIEV LGKDAPLTAG NFVDLVSKGV YDGTSFHRVV KEPQPFVVQG GDPQSKDPKV
PAQQLGTGSY QDPNTKQPRY LPLEITPEGA SQPVYSRTLE QASVSRPPKL RHQRGAVAMA
RASFPDSASS QFYIALSDLG FLDGNYAVFG YVRSDMTVVD RIKQGDRIQS AKVTAGLDNL
KRP