Gene Synpcc7942_0647 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0647 
Symbol 
ID3775630 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp641196 
End bp641738 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content56% 
IMG OID637799059 
Producthypothetical protein 
Protein accessionYP_399666 
Protein GI81299458 
COG category[S] Function unknown 
COG ID[COG1376] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGTTGC GCCTTCTCTG GAACTCCAGC TTGCTCGTCG CCTGCTGTGC GATCGCCAGC 
CCAGTTGCGG CAATTCCGAT TCCCCCACCA GCCACAATGG CGGTTCCAGC TATTCCAGTA
GAAGCAACGA TCGCGCCTCC TCCAGCACCT GCCCCAACCA CAAAGTTAGT TTTGAGTTTG
CGGCAGCGCC GAGTGACGGT CTATCGCGAT CGCTTGGCGA TCGCGAGTTA CCCTGTGGGC
ATCGGTAAGC CGGGTTGGGA AACGCCCCGT GGTACTTTTC GGGTCATGAG CAAAATCGTC
AATCCGACTT GGCAGCATCC TTGGAATGGC AGTCTTGTTC CTCCCGGTCC CAACAATCCT
CTAGGCGATC GCTGGATCGG TTTTTGGACT GATGGCAAAA ACTCGATTGG TTTCCATGGA
ACGACGGCTG AATCCCTGAT TGGCCAAGCG GTTTCCCATG GCTGCGTGCG GATGAAAAAT
CGCGATATCC GTGCTCTGTT TGAATTAGTA GAGGAAGGCG CGATCGTCAG CGTTCAACCT
TGA
 
Protein sequence
MALRLLWNSS LLVACCAIAS PVAAIPIPPP ATMAVPAIPV EATIAPPPAP APTTKLVLSL 
RQRRVTVYRD RLAIASYPVG IGKPGWETPR GTFRVMSKIV NPTWQHPWNG SLVPPGPNNP
LGDRWIGFWT DGKNSIGFHG TTAESLIGQA VSHGCVRMKN RDIRALFELV EEGAIVSVQP