Gene Synpcc7942_0608 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0608 
Symbol 
ID3775590 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp595756 
End bp596298 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content56% 
IMG OID637799019 
Producthypothetical protein 
Protein accessionYP_399627 
Protein GI81299419 
COG category[S] Function unknown 
COG ID[COG1791] Uncharacterized conserved protein, contains double-stranded beta-helix domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.938645 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGTCC TAACGATCTA TCGCGAAGAT CTGCCTGAAC AGCCTTTGAC CCAAACCACG 
GACGCGGCTG AAATTGCAGC CTTGCTTGCT CAACAAGGAC TGCGGTTTGA ACGCTGGCCG
GCTCAGGTGG AGTTGGCTGA TGATGCGACG CCGGAGCAGA TTTTGGCGGC CTATGCGACG
GAAGTCGATC GCGTCAAAAC CGAAGGCGGT TACATCACCG TTGATGCGGT TAGCCTGCGC
CCCGATCATC CCGATCGCGC TGCTCTTCGC CAGAAGTTTT TGGCAGAACA CATCCATAGC
GAAGACGAAG TTCGCTTTTT TGTTGCAGGA CAAGGCTTGT TCTCGCTGCA CCTAGGCGAT
CACGTCTATG CCCTACTCTG CACCCAAAAT GACTGGATCA GCGTTCCGGC TGGAACGCGC
CACTGGTTTG ATATGGGCAG TCAGCCCTAC TTCACGGCTC TGCGTTTCTT TAACAATCCC
GAAGGCTGGG TCGCTCAGTT TACCGGCAGC GACATCGCCA GTCAGTTCCC GCTCCTGCCC
TGA
 
Protein sequence
MTVLTIYRED LPEQPLTQTT DAAEIAALLA QQGLRFERWP AQVELADDAT PEQILAAYAT 
EVDRVKTEGG YITVDAVSLR PDHPDRAALR QKFLAEHIHS EDEVRFFVAG QGLFSLHLGD
HVYALLCTQN DWISVPAGTR HWFDMGSQPY FTALRFFNNP EGWVAQFTGS DIASQFPLLP