Gene Synpcc7942_0600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0600 
Symbol 
ID3775318 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp588528 
End bp590060 
Gene Length1533 bp 
Protein Length510 aa 
Translation table11 
GC content57% 
IMG OID637799011 
Productserine/threonine protein kinase 
Protein accessionYP_399619 
Protein GI81299411 
COG category[K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms 
COG ID[COG0515] Serine/threonine protein kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0109114 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTACTG CAGATCCCAA CTTGGGACGC CTGCTCGACC AGCGCTATCA ACTCTTGGCC 
CTGATCGGAC AAGGAGCAAT GGGGCGCGTC TACCAAGCCC GCCATATCGT CCTTGAAGGC
ATCGTTGCCA TCAAACTCCT GAGTCGGAGC ATCGCCGACC CTCGCCAGCA AGAACGCTTT
GCTGAGGAAG CCCGCATCTG TGCCCAGCTC AGTCAAACCA GCACCACGAT CGTGCGGGTC
ACAGACTATG GATTAGCAGA GCAGCAGCCG TACTTCGTCA TGGAGTACCT CGAGGGCGAA
ACGCTCAAGG ATCTTCTGCT GCGCGGCTCG CTTCCTCTGG CCCAATTTTT GAAAATTACC
TTGGCGGTTG CCGAGAGTTT AGTGCAGGCG CACTACGGCG TCGAGAGCCA CGGGCAACGG
ATCCCAATCA TTCACCGCGA TATCAAGCCC AGTAACATCT TCATCACGAC GACTGGCGAA
ATTAAGTTGT TGGATTTTGG GATTGCCCAA CGCTGGCAAG AGGTTGGCGA GACAGAGAAA
CAAGCCTTCC TCGGCACCCT CTCCTACGCC TCCCCTGAGC AGCTCAATCG CCAGGAGCTC
GACCCCCGCA CGGACATCTA CAGCTTAGGC GTGGTGATGT ACCAAATGTT GACGGGTCAA
CTGCCGGTGC AAGCGGAAAC CCTCATGAAC CTCAACAGCT GGATTGAAGC GCACAATCAT
CCCGTACGGC CCCTAAAGGA AGTCGCCCCC TTCCTTAGCC TGCCGCGATC ACTGCAGCGG
ATGATCGAGA ATTGCCTAGC CCGCGATCGC AGCGATCGCC CCCAGACAGC AGCCGAGCTT
GTTCGGGTAC TAGCCCCTCT CGAAGAGCGC TATCAACTGG CCGACACCTT CAGCGATCGA
CTAGAAAGCT ACCTTCAGAA GTTGCCCACT GCACCTCCAG ACACAGAGAC AGAGCCCACC
GTTTCGGCCG AAGCCCTCTG TCGCCTCCAA AGCTGGCCTG CCGACAAACC CTGCGCCCAA
ATTGTCTTTC CTCAAATGAT TCGGGCAGGC AAACTGGCAG TACCCAGTCT TTGGGCGATG
TTCCCCGCAG CAGATATCGA CCGCTGGCGC CTTAACCGCC TCTACTTGCG AACCTATCGC
ACCTTCTTCT GCACCTTAGT CCCAAGACCG ATGCTGCTTT GGGTCACCGC TATCCAGGGC
AATCGCGACC AACGCCTGCG CTGGCTGAAA AACTTTTTAG AACTCCAACA GCAGAGCAAT
CAGGAATTAC TGCAGGCGAT CGCTCTCCAA CGACACTATC GCATTCTCTT TTTTGCCCTC
GAGCACCCCC AGCGCTGTGC CTACGTTTTA GACCTCAAAA TTGACGAACA CCAAGCCGAT
CAAATTCGGC AGTGGATTCT CCAGGCCAGT CAACTCCCTC GGCAGGGGTC TGCCAGCAAT
AGTCGCGAAC ATCTGCAGCT GGAATTTGAG CGTAAGCGTC CTGGACTCGA AGCCCTACTA
CAGGGCAGCA CGGGGTCCAT TCGTCCGCAG TGA
 
Protein sequence
MATADPNLGR LLDQRYQLLA LIGQGAMGRV YQARHIVLEG IVAIKLLSRS IADPRQQERF 
AEEARICAQL SQTSTTIVRV TDYGLAEQQP YFVMEYLEGE TLKDLLLRGS LPLAQFLKIT
LAVAESLVQA HYGVESHGQR IPIIHRDIKP SNIFITTTGE IKLLDFGIAQ RWQEVGETEK
QAFLGTLSYA SPEQLNRQEL DPRTDIYSLG VVMYQMLTGQ LPVQAETLMN LNSWIEAHNH
PVRPLKEVAP FLSLPRSLQR MIENCLARDR SDRPQTAAEL VRVLAPLEER YQLADTFSDR
LESYLQKLPT APPDTETEPT VSAEALCRLQ SWPADKPCAQ IVFPQMIRAG KLAVPSLWAM
FPAADIDRWR LNRLYLRTYR TFFCTLVPRP MLLWVTAIQG NRDQRLRWLK NFLELQQQSN
QELLQAIALQ RHYRILFFAL EHPQRCAYVL DLKIDEHQAD QIRQWILQAS QLPRQGSASN
SREHLQLEFE RKRPGLEALL QGSTGSIRPQ