Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_0585 |
Symbol | |
ID | 3774823 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 566168 |
End bp | 567388 |
Gene Length | 1221 bp |
Protein Length | 406 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637798993 |
Product | PDZ/DHR/GLGF |
Protein accession | YP_399604 |
Protein GI | 81299396 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0000000357237 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.0103671 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTCATC GTCGTTCTGG TCAGCGCCGG TTATCAGTCC GCGCAATCTT GAGTCACACC CTGGCAATTA GCTTGGGCGT CTTGGTGACA GTGGGCGGAT TACAAGCACG TCCCTCTTTG GCCCAAGCAG CACCTGTAGA AATCGCACAA GCGACTCCTG CGAATACAGC AGCTCCCAAC AGTAACCCAG ATAGTTTTGT TGCAGCAGCA GTCCGTCAGA TTGGCCCTGC AGTCGTTCGG ATTGATACTG AGCGGACGGT GACACGGCGG GCAGCTCCCA TGTTTGATGA CCCGTTTTTC CGTGAGTTTT TTGGGTCTGA CTTTTTTGGC AATGTCAATC CGCCAGCACG GCAAGAAGTA CAGCGTGGTC AGGGTTCTGG TTTTGTCGTA GATGGTAACG GCTTGATCAT GACCAATGCC CACGTGGTCG CCAATGCGGA TCAAGTGCGG GTCACGCTAC GGGATGGTCG AGAATTTACG GGACGAGTGC GGGGTGCAGA CTCTGTCACT GATTTAGCGT TGGTAGAAGT TGATACCAAA GGTGAACGGC TGCCCACTGC TCGCATCGGC AATTCCAGTA ATGTCGAGGT CGGAGACTGG GCGATCGCGA TCGGGAACCC GCTCGGACTC GACAACACCG TCACTTTAGG GATTGTCAGC AGCCTTGGCC GCCGGAGCAG CGCTGTCGGT ATTCCGGATA AGCGCCTCGA CTTTATCCAG ACCGATGCAG CGATCAACCC CGGTAATTCG GGCGGCCCGC TGGTCAATAG TCGGGGCGAA GTGATTGGCA TTAACACCGC CATTCGCCAA GCGCCGGGTG CAGGGATTGG CTTTGCGATT CCAGTTAACA CGGCCAAGCA AATTGAAACG CAGCTGCTGA AAAACGGGAA AGTCTCACAC TCCTACCTAG GGGTGCAGCT GCTCTCCCTG ACGCCACAAA TGGCTCGAGA TAACAACCGC GATCCCAACT CCACCGTGCG CTTACCAGAA GTGCAAGGTG TCTTAATCAT GGGGGTTCAG CGCAATGCAC CCGCTGCTAC TGCGGGACTG CGACGCGGAG ATGTGGTGAT AGCGATTGAT GGTCAAGCGG TGACGACTGC GGATGAGTTC CAGCGCCGTG TCGAAGCGAG CCAAGTCGGC CAGTCACTCA ACCTCAGCGT GATTCGCGAC GGTAACCGCC AGCAGATTGC TGTGCGCACT GGCGAACTCC AAGCTGGTTA A
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Protein sequence | MRHRRSGQRR LSVRAILSHT LAISLGVLVT VGGLQARPSL AQAAPVEIAQ ATPANTAAPN SNPDSFVAAA VRQIGPAVVR IDTERTVTRR AAPMFDDPFF REFFGSDFFG NVNPPARQEV QRGQGSGFVV DGNGLIMTNA HVVANADQVR VTLRDGREFT GRVRGADSVT DLALVEVDTK GERLPTARIG NSSNVEVGDW AIAIGNPLGL DNTVTLGIVS SLGRRSSAVG IPDKRLDFIQ TDAAINPGNS GGPLVNSRGE VIGINTAIRQ APGAGIGFAI PVNTAKQIET QLLKNGKVSH SYLGVQLLSL TPQMARDNNR DPNSTVRLPE VQGVLIMGVQ RNAPAATAGL RRGDVVIAID GQAVTTADEF QRRVEASQVG QSLNLSVIRD GNRQQIAVRT GELQAG
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