Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_0471 |
Symbol | |
ID | 3773417 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | + |
Start bp | 457882 |
End bp | 458712 |
Gene Length | 831 bp |
Protein Length | 276 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637798878 |
Product | ABC-type sugar transport system permease component-like |
Protein accession | YP_399490 |
Protein GI | 81299282 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0395] ABC-type sugar transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCGTCTCT CTGCTGGATT CCGATCGCTT CTGCTCTACC TGCTGCTGGG GACGATCGCG GTGGCGATGT TGATCCCGCT CCTCTGGCTG GTCAGCACGG CTTTCAAGTC AGCTGGTGAG GATATTTTTC AGTTTCCGCC ACAGTTTCTG CCCACCCAAC CGACGCTCGA TAACTTCCGC CGCGTCTGGA CTGAGAATCC GCTGGGGCAA TACTTCCTTA ACAGCACCTG GGTGGCTCTG TTGACGGTGG GACTTAATCT GCTGTTTTGC TCCCTGGCCG CTTATCCCTT GGCGCGATTG GAATTTAAAG GGCGGCAAAC TTTGTTTCTG CTGATTGTGG CAACCATCCT GATTCCCTTT CAGGTGGTGA TGATTCCGCT CTACGTACTG ATCATCAATC TTGGCCTGCG CAACACCTAC CTTGGCTTGG TCTTCCCTTA TTTGGCTTCG GCCTTTGGCA TTTTTCTGTT GCGCCAAGCC TTTCAAGGAA TCCCCAAAGA CTTGGAAGAG GCCGCACGCA TCGATGGCTG CAATGACTTG GGCGTCTGGT GGAATGTGAT GATTCCGTCG GCGCGGCCTG CACTGATTAC GCTGGCGATC TTCGTGTTCA TCGGCTCTTG GAGTGACTTC CTCTGGCCGC TGATCATTTT GGATGAGCCC GATCGCTACA CCTTGCCCTT GGGGATCGCG ACCCTCGCCA GCGGCTTCTC CCTCGATTGG CGATTGGTAG CGGCGGGTTC AGTGTTGTCG ATTTTGCCGG TCTTTGGCGT TTTCTTGGCG CTGCAGCGCT ACATTGTGCC TTCGGCGGCT GCCAGTGGTG TGAAGGGATA A
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Protein sequence | MRLSAGFRSL LLYLLLGTIA VAMLIPLLWL VSTAFKSAGE DIFQFPPQFL PTQPTLDNFR RVWTENPLGQ YFLNSTWVAL LTVGLNLLFC SLAAYPLARL EFKGRQTLFL LIVATILIPF QVVMIPLYVL IINLGLRNTY LGLVFPYLAS AFGIFLLRQA FQGIPKDLEE AARIDGCNDL GVWWNVMIPS ARPALITLAI FVFIGSWSDF LWPLIILDEP DRYTLPLGIA TLASGFSLDW RLVAAGSVLS ILPVFGVFLA LQRYIVPSAA ASGVKG
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