Gene Synpcc7942_0407 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0407 
Symbol 
ID3773352 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp400429 
End bp400671 
Gene Length243 bp 
Protein Length80 aa 
Translation table11 
GC content58% 
IMG OID637798813 
Productphotosystem I reaction center subunit X 
Protein accessionYP_399426 
Protein GI81299218 
COG category 
COG ID 
TIGRFAM ID[TIGR03049] photosystem I reaction center subunit PsaK 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCCAA CCACGGTGGA ATGGAACGCC AATGTCGCCG CAATCATGAT CACCGCCAAC 
CTGTTTGCGA TCGCGATCGG CTACTTTGCC ATCCGCAACC GCGGCGTGGG CCCGGCATTA
CCGGTGCCGC TACCCGCAAT TTTTAGTGGT TTTGGTCTGC CCGAGTTATT GGCAACCGCC
AGCTTTGGCC ATCTACTGGG TGCTGGTTTC GTCCTAGGAC TAGCCCAAGC AGGCTTGCTC
TAG
 
Protein sequence
MNPTTVEWNA NVAAIMITAN LFAIAIGYFA IRNRGVGPAL PVPLPAIFSG FGLPELLATA 
SFGHLLGAGF VLGLAQAGLL