Gene Synpcc7942_0385 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0385 
Symbol 
ID3774906 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp377321 
End bp378694 
Gene Length1374 bp 
Protein Length457 aa 
Translation table11 
GC content57% 
IMG OID637798791 
Productgeranylgeranyl reductase 
Protein accessionYP_399404 
Protein GI81299196 
COG category[C] Energy production and conversion 
COG ID[COG0644] Dehydrogenases (flavoproteins) 
TIGRFAM ID[TIGR02023] geranylgeranyl reductase
[TIGR02028] geranylgeranyl reductase
[TIGR02032] geranylgeranyl reductase family 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGATCCTG TCGTTCTGTT AACGTCTGTT TCAGCTTTGA CACAGACGCA AAAGCCCTGT 
CGGGGCCGAC GAAATGCCCG TGATAGGATC CCAACCTGTA GCCAAGAAAC GTTAGAGGGC
AAAGCGTTGG CACTTCGGGT GGCTGTGGTC GGCGGCGGAC CGGCGGGATC TTGTGCAGCG
GAAACGCTCG TCAAAGCCGG TATTGAGACT TATCTAATCG AGCGCAAGTT GGACAACGCA
AAGCCCTGCG GCGGTGCAAT CCCGCTCTGC ATGGTCAGCG AGTTCGACCT GCCGGCGGAG
ATCATCGATC GCCGCGTGCG CAACATGAAA ATGATTTCGC CGTCCAACCG CGAGGTCAAC
ATCAATCTCG ACAATGCCGA CGAATACATC GGCATGACCC GTCGGGAGGT ACTGGATGGC
TTCCTGCGCG ATCGCGCGGC CAAGCTGGGC ACCAAGCTGA TCAACGGTAC GCTCTTCCGT
TTGGAACTGC CGAAGGGCGA TCGCGATCCC TACGTGCTGC ACTACGCCGA TCACTCCAAC
GGCAGTCTAG AAGGCATTCC TTCGACCCTA GAAGTGGATG TGGTGATTGG GGCGGATGGC
GCTAACTCGC GTATCGCCAA AGCGATCGAT GCGGGCGATT ACAACTACGC GATTGCTTTC
CAAGAGCGCA TCCGTCTGCC TGAAGACAAG ATGCATTACT ACGAAAATCT GGCGGAAATG
TACGTCGGTG GCGACGTTTC GCCCGACTTC TACGCGTGGG TGTTCCCCAA ATACGACCAC
GTAGCAGTCG GTACGGGCAC GATGCATGTC AACCAACGCC TGATCAAGAA GCTGCAAGCA
GGCATTCGCG CTCGGGCTGC AAACCGTTTG GAAGGCGGCA AGATCATCAA GGTCGAAGCA
CACCCGATCC CCGAGCATCC GCGTCCGCGT CGGGTTGTTG GCCGGGCAGC ACTAGTTGGC
GATGCGGCCG GCTACGTGAC TAAGTCTTCA GGTGAAGGCA TCTACTTCGC GGCCAAATCG
GGTCGGATGT GTGCCGAAAC GATCGTCGAA ACCTCGAACA ACGGCGCTCG CATTCCTACC
GAAGCGGATC TGAAGCAGTA TCTGCGTCGC TGGGACAAAA AATACGGCAC CACCTACAAA
GTGCTGGACT TGCTGCAAAC CGTCTTCTAT CGCTCGGATG CAACCCGTGA AGCCTTCGTG
GAAATGTGCG ACGACAAAGA TGTGCAGCGT CTGACCTTCG ACAGCTACCT CTACAAAACC
GTGGTGCCGG CCAATCCCTT AGTGCAGCTA AAAATCACGG CCAAAACCCT CGGTAGCTTG
CTACGCGGCA ATGCCTTGGC ACCAGCGGAA TATAAACCGA TCGATGCGGC TTAA
 
Protein sequence
MDPVVLLTSV SALTQTQKPC RGRRNARDRI PTCSQETLEG KALALRVAVV GGGPAGSCAA 
ETLVKAGIET YLIERKLDNA KPCGGAIPLC MVSEFDLPAE IIDRRVRNMK MISPSNREVN
INLDNADEYI GMTRREVLDG FLRDRAAKLG TKLINGTLFR LELPKGDRDP YVLHYADHSN
GSLEGIPSTL EVDVVIGADG ANSRIAKAID AGDYNYAIAF QERIRLPEDK MHYYENLAEM
YVGGDVSPDF YAWVFPKYDH VAVGTGTMHV NQRLIKKLQA GIRARAANRL EGGKIIKVEA
HPIPEHPRPR RVVGRAALVG DAAGYVTKSS GEGIYFAAKS GRMCAETIVE TSNNGARIPT
EADLKQYLRR WDKKYGTTYK VLDLLQTVFY RSDATREAFV EMCDDKDVQR LTFDSYLYKT
VVPANPLVQL KITAKTLGSL LRGNALAPAE YKPIDAA