Gene Synpcc7942_0375 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0375 
Symbol 
ID3774896 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp368929 
End bp370344 
Gene Length1416 bp 
Protein Length471 aa 
Translation table11 
GC content58% 
IMG OID637798781 
Productprocessing protease 
Protein accessionYP_399394 
Protein GI81299186 
COG category[R] General function prediction only 
COG ID[COG0612] Predicted Zn-dependent peptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCCGTC GCTGGCTGCT GATGGCTGCG GTGCTTGTCC TCTGCTGGCT GCAAATGCCG 
GTGACCGCGA TCGCGGCAGT CGATCTGCAG CGTCCTGATA TCGATCGCTG TCGTCTGGAC
AATGGCCTGC GGGTCTATCT GCTGGAAGAT CGCACTCTGC CCCTGGTCAG TGGGTTGCTC
TTGGCGGATG CCGGCTCCCG CTTGGATCCT GCTGATGCGT GGGGAACTGC AGACTTTACG
GCTGCACTGC TAAGGCAGGG GGGTAGCCAA GCTTATCCCG TTGGGCAACT CGATCAAGCC
TTAGAGGAAC GGGCCGCCAT GCTGGAATCC AATCCGGGCG TGACTGTCGC CAGCCTCAGT
TTCCGCAGCT TCAGTCCTGA CTTTCCCTTT GTCCTCGATC GCTTGTTTGA GGTACTGACC
ACCCCGGCTT TTCCGCCCGA TCGCCTGCAA CAACTGCGCG ATCGCACCCT AGCCGCCCTA
GCGCGGCAGA ATGATCGCCC CGAAGCGATC GCTAGTCGCG AACTGCCCAA GTTGGTCTAT
GGACCAACGG ACGCTTTGGC CCGCAGCTTG ACTGCAGCCA ATGTGCAACA GGTAGAACGG
GCGGATTTAG TGGCTTTTCA TCAACGCTTT TACCGTCCCG ATCGCCTCTG GTTAGGCATC
GTCGGTGATT TTCAGGCAGC TGAACTTTGT CAAAGCCTGC AAACGACGTG GGGGAAATGG
CAGCCACCTG CAACGGCCGC AATTGCACCA GCTGCTTCAG CTCAGCTTAC AGTGCCAGCG
ACTGCGGTCT ACCTCATCGA TCAGCCCCAG CTCAGCCAAA GTACGGTGCA GATGGCCAGC
CTGGGGGGGC GGTTGGATGA CCCAGATTAT GCAGCGCTAA CCGTCCTCAA CGAACTACTG
AATGGACTAT CGGGGCGACT TTACAATCAA ATTCGCTCCC GCCAAGGTCT GGCCTATAGC
GTCTACGGCA GTGGGCAACC CAACTTTGAG CGACCTGGAT TATTTGTCGC CGGCGGTCAA
ACGGCCCAAG CAACCACAGC TGCACTGATT CAAGCCCTGC GTACGGAACT GGCTGCCGTG
CGATCGCAGC CGATCAGCGA GCGGGAACTA AAGCAAGTCC GCGATCGCCT ACTCAATAGC
TTCGTGTTTA ACTTTCAGTC GCCGGATCAG ACCTTGGGTC GGTTGCTGCG GACAGAGTTT
TTCCAGTATC CCGAAGACTT TCTCTGGCGC TATCGAGAGG CCCTACTCAA GGTGACCCCA
GCTGATGTGC AAACAGTTGC ACAGCGCTGG ATTCTGCTCG ACCAAATGCC GATCCTCGTC
GTGGGCGATC GCCAAGCGCT TTTACCTCAG CTGCAGACCT TGGGCCTTCC CATTCAAGAC
TGGCCACTGG ATCAGCCGGT CACAGCAGCA CCCTGA
 
Protein sequence
MIRRWLLMAA VLVLCWLQMP VTAIAAVDLQ RPDIDRCRLD NGLRVYLLED RTLPLVSGLL 
LADAGSRLDP ADAWGTADFT AALLRQGGSQ AYPVGQLDQA LEERAAMLES NPGVTVASLS
FRSFSPDFPF VLDRLFEVLT TPAFPPDRLQ QLRDRTLAAL ARQNDRPEAI ASRELPKLVY
GPTDALARSL TAANVQQVER ADLVAFHQRF YRPDRLWLGI VGDFQAAELC QSLQTTWGKW
QPPATAAIAP AASAQLTVPA TAVYLIDQPQ LSQSTVQMAS LGGRLDDPDY AALTVLNELL
NGLSGRLYNQ IRSRQGLAYS VYGSGQPNFE RPGLFVAGGQ TAQATTAALI QALRTELAAV
RSQPISEREL KQVRDRLLNS FVFNFQSPDQ TLGRLLRTEF FQYPEDFLWR YREALLKVTP
ADVQTVAQRW ILLDQMPILV VGDRQALLPQ LQTLGLPIQD WPLDQPVTAA P