Gene Synpcc7942_0357 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0357 
Symbol 
ID3774878 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp349875 
End bp351278 
Gene Length1404 bp 
Protein Length467 aa 
Translation table11 
GC content59% 
IMG OID637798763 
Productinorganic carbon transporter 
Protein accessionYP_399376 
Protein GI81299168 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3307] Lipid A core - O-antigen ligase and related enzymes 
TIGRFAM ID[TIGR00947] probable bicarbonate transporter, IctB family 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.152421 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.510876 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGTCT GGCAAACTCT GACTTTTGCC CATTACCAAC CCCAACAGTG GGGCCACAGC 
AGTTTCTTGC ATCGGCTGTT TGGCAGCCTG CGAGCTTGGC GGGCCTCCAG CCAGCTGTTG
GTTTGGTCTG AGGCACTGGG TGGCTTCTTG CTTGCTGTCG TCTACGGTTC GGCTCCGTTT
GTGCCCAGTT CCGCCCTAGG GTTGGGGCTA GCCGCGATCG CGGCCTATTG GGCCCTGCTC
TCGCTGACAG ATATCGATCT GCGGCAAGCA ACCCCCATTC ACTGGCTGGT GCTGCTCTAC
TGGGGCGTCG ATGCCCTAGC AACGGGACTC TCACCCGTAC GCGCTGCAGC TTTAGTTGGG
CTAGCCAAAC TGACGCTCTA CCTGTTGGTT TTTGCCCTAG CGGCTCGGGT TCTCCGCAAT
CCCCGTCTGC GATCGCTGCT GTTCTCGGTC GTCGTGATCA CATCGCTTTT TGTCAGTGTC
TACGGCCTCA ACCAATGGAT CTACGGCGTT GAAGAGCTGG CGACTTGGGT GGATCGCAAC
TCGGTTGCCG ACTTCACCTC ACGGGTTTAC AGCTATCTGG GCAACCCCAA CCTGCTGGCT
GCTTATCTGG TGCCGACGAC TGCCTTTTCT GCAGCAGCGA TCGGGGTGTG GCGCGGCTGG
CTCCCCAAGC TGCTGGCGAT CGCTGCGACA GGTGCGAGCA GCTTATGTCT GATCCTCACC
TACAGTCGCG GTGGCTGGCT GGGTTTTGTC GCCATGATTT TTGTCTGGGC GTTATTAGGG
CTCTACTGGT TTCAACCCCG TCTACCCGCA CCCTGGCGAC GCTGGCTATT CCCAGTCGTA
TTGGGTGGAC TAGTCGCGGT GCTCTTGGTG GCGGTGCTTG GACTTGAGCC GTTGCGCGTG
CGCGTGTTGA GCATCTTTGT GGGGCGTGAA GACAGCAGCA ACAACTTCCG GATCAATGTC
TGGCTGGCGG TGCTGCAGAT GATTCAAGAT CGGCCTTGGC TGGGCATCGG CCCCGGCAAT
ACCGCCTTTA ACCTGGTTTA TCCCCTCTAT CAACAGGCGC GCTTTACGGC GTTGAGCGCC
TACTCCGTCC CGCTGGAAGT CGCGGTTGAG GGCGGACTAC TGGGCTTGAC GGCCTTCGCT
TGGCTGCTGC TGGTCACGGC GGTGACGGCG GTGCGGCAGG TGAGCCGACT GCGGCGCGAT
CGCAATCCCC AAGCCTTTTG GTTGATGGCT AGCTTGGCCG GTTTGGCAGG AATGCTGGGT
CACGGTCTGT TTGATACCGT GCTCTATCGA CCGGAAGCCA GTACGCTCTG GTGGCTCTGT
ATTGGAGCGA TCGCGAGTTT CTGGCAGCCC CAACCTTCCA AGCAACTCCC TCCAGAAGCC
GAGCATTCAG ACGAAAAAAT GTAG
 
Protein sequence
MTVWQTLTFA HYQPQQWGHS SFLHRLFGSL RAWRASSQLL VWSEALGGFL LAVVYGSAPF 
VPSSALGLGL AAIAAYWALL SLTDIDLRQA TPIHWLVLLY WGVDALATGL SPVRAAALVG
LAKLTLYLLV FALAARVLRN PRLRSLLFSV VVITSLFVSV YGLNQWIYGV EELATWVDRN
SVADFTSRVY SYLGNPNLLA AYLVPTTAFS AAAIGVWRGW LPKLLAIAAT GASSLCLILT
YSRGGWLGFV AMIFVWALLG LYWFQPRLPA PWRRWLFPVV LGGLVAVLLV AVLGLEPLRV
RVLSIFVGRE DSSNNFRINV WLAVLQMIQD RPWLGIGPGN TAFNLVYPLY QQARFTALSA
YSVPLEVAVE GGLLGLTAFA WLLLVTAVTA VRQVSRLRRD RNPQAFWLMA SLAGLAGMLG
HGLFDTVLYR PEASTLWWLC IGAIASFWQP QPSKQLPPEA EHSDEKM