Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_0357 |
Symbol | |
ID | 3774878 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 349875 |
End bp | 351278 |
Gene Length | 1404 bp |
Protein Length | 467 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637798763 |
Product | inorganic carbon transporter |
Protein accession | YP_399376 |
Protein GI | 81299168 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3307] Lipid A core - O-antigen ligase and related enzymes |
TIGRFAM ID | [TIGR00947] probable bicarbonate transporter, IctB family |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.152421 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.510876 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGTCT GGCAAACTCT GACTTTTGCC CATTACCAAC CCCAACAGTG GGGCCACAGC AGTTTCTTGC ATCGGCTGTT TGGCAGCCTG CGAGCTTGGC GGGCCTCCAG CCAGCTGTTG GTTTGGTCTG AGGCACTGGG TGGCTTCTTG CTTGCTGTCG TCTACGGTTC GGCTCCGTTT GTGCCCAGTT CCGCCCTAGG GTTGGGGCTA GCCGCGATCG CGGCCTATTG GGCCCTGCTC TCGCTGACAG ATATCGATCT GCGGCAAGCA ACCCCCATTC ACTGGCTGGT GCTGCTCTAC TGGGGCGTCG ATGCCCTAGC AACGGGACTC TCACCCGTAC GCGCTGCAGC TTTAGTTGGG CTAGCCAAAC TGACGCTCTA CCTGTTGGTT TTTGCCCTAG CGGCTCGGGT TCTCCGCAAT CCCCGTCTGC GATCGCTGCT GTTCTCGGTC GTCGTGATCA CATCGCTTTT TGTCAGTGTC TACGGCCTCA ACCAATGGAT CTACGGCGTT GAAGAGCTGG CGACTTGGGT GGATCGCAAC TCGGTTGCCG ACTTCACCTC ACGGGTTTAC AGCTATCTGG GCAACCCCAA CCTGCTGGCT GCTTATCTGG TGCCGACGAC TGCCTTTTCT GCAGCAGCGA TCGGGGTGTG GCGCGGCTGG CTCCCCAAGC TGCTGGCGAT CGCTGCGACA GGTGCGAGCA GCTTATGTCT GATCCTCACC TACAGTCGCG GTGGCTGGCT GGGTTTTGTC GCCATGATTT TTGTCTGGGC GTTATTAGGG CTCTACTGGT TTCAACCCCG TCTACCCGCA CCCTGGCGAC GCTGGCTATT CCCAGTCGTA TTGGGTGGAC TAGTCGCGGT GCTCTTGGTG GCGGTGCTTG GACTTGAGCC GTTGCGCGTG CGCGTGTTGA GCATCTTTGT GGGGCGTGAA GACAGCAGCA ACAACTTCCG GATCAATGTC TGGCTGGCGG TGCTGCAGAT GATTCAAGAT CGGCCTTGGC TGGGCATCGG CCCCGGCAAT ACCGCCTTTA ACCTGGTTTA TCCCCTCTAT CAACAGGCGC GCTTTACGGC GTTGAGCGCC TACTCCGTCC CGCTGGAAGT CGCGGTTGAG GGCGGACTAC TGGGCTTGAC GGCCTTCGCT TGGCTGCTGC TGGTCACGGC GGTGACGGCG GTGCGGCAGG TGAGCCGACT GCGGCGCGAT CGCAATCCCC AAGCCTTTTG GTTGATGGCT AGCTTGGCCG GTTTGGCAGG AATGCTGGGT CACGGTCTGT TTGATACCGT GCTCTATCGA CCGGAAGCCA GTACGCTCTG GTGGCTCTGT ATTGGAGCGA TCGCGAGTTT CTGGCAGCCC CAACCTTCCA AGCAACTCCC TCCAGAAGCC GAGCATTCAG ACGAAAAAAT GTAG
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Protein sequence | MTVWQTLTFA HYQPQQWGHS SFLHRLFGSL RAWRASSQLL VWSEALGGFL LAVVYGSAPF VPSSALGLGL AAIAAYWALL SLTDIDLRQA TPIHWLVLLY WGVDALATGL SPVRAAALVG LAKLTLYLLV FALAARVLRN PRLRSLLFSV VVITSLFVSV YGLNQWIYGV EELATWVDRN SVADFTSRVY SYLGNPNLLA AYLVPTTAFS AAAIGVWRGW LPKLLAIAAT GASSLCLILT YSRGGWLGFV AMIFVWALLG LYWFQPRLPA PWRRWLFPVV LGGLVAVLLV AVLGLEPLRV RVLSIFVGRE DSSNNFRINV WLAVLQMIQD RPWLGIGPGN TAFNLVYPLY QQARFTALSA YSVPLEVAVE GGLLGLTAFA WLLLVTAVTA VRQVSRLRRD RNPQAFWLMA SLAGLAGMLG HGLFDTVLYR PEASTLWWLC IGAIASFWQP QPSKQLPPEA EHSDEKM
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