Gene Synpcc7942_0281 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0281 
Symbol 
ID3773843 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp277043 
End bp278116 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content59% 
IMG OID637798687 
Productglycosyltransferase 
Protein accessionYP_399300 
Protein GI81299092 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0472] UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGCCC CGGCTGCGCC TACTTCGCTG TATCCGTTGT TGGCCTTTTG TGTCTCGGCC 
TTGGTGGTCG TCCTGACGAC ACCAGTGGTG CGTAGTCTTG GCCTGCAGCG GGGGCTAGTC
GATCAGCCCG GTGAGCGCAA GGTTCACCAT CGACCAATGG TGCGGCTGGG AGGCATTTCG
ATCTTTCTGG GCTCTTTAGC CGCCCTACTA CTGACTTGGT GGCTAGGCGG TTTTGGCGTC
CTGCCCTCCG ATCGCGAATA CGAAATCTGG GGCGTGACGA TCGGTGGGCT GGTCTTCTTT
TTGATTGGCC TCGCTGATGA CTTTTTCTCG CTCTCACCGA TCACGCGACT GCTGGCCCAG
ATGACGGTGG CTGCGGGTGT TTGGTTGGTG GGGGTCCGCA TTGATCTCCT GACAATTCCC
TTCGTCGGGG GCGTCTATGT ACTGCCAGAG TGGCTGAGCC TGCCGGTCAC GGTTCTCTGG
CTAGTGGGCA TGACCAATGC GATCAACTGG ATTGATGGGC TCGATGGATT AGCCGCTGGA
GTGTCGGGCA TTTCCGCCGT TATTTTGCTG ATCGTGGCGC TAGCCGTGCA GCAACCGGCT
GCTGCGCTAG TTGCTGCTGC CTTAGCTGGG GGGTGCCTTG GCTTTCTGCG CTACAACTTC
AACCCCGCGA AGATTTTCAT GGGCGATGGC GGCTCCTACT TTATTGGCTT CACCTTGGCT
GGGGTCGGGG TGATTGGTCT GGTCAAAAGT CTGACAACGT TTGCGGTGCT ACTGCCCTAC
TTGATTTTGG CAGTGCCGAT GTTGGACATG GTGACGGTCA TCCTCGATCG CTTGCGCAGC
GGTCAATCGC CCTTCAAAGC CGATAAACGC CACCTCCACC ATCGCCTGTT GGATGCGGGC
TTTTCTCATC GCCGCACGGT CGTCCTAATC TATGGGCTGA CCCTCTGTGC CGGGAGCTGG
GCCCTCGCCT TCGCCAATAT TCCTAGCGGC TACGCCTACG CGATCGCCTC AACCCTATTG
GTGATTGTGC TGTTCTGGCG ATCGCGGCAG CGATCGCGCC GTTCTCTTCC CTGA
 
Protein sequence
MTAPAAPTSL YPLLAFCVSA LVVVLTTPVV RSLGLQRGLV DQPGERKVHH RPMVRLGGIS 
IFLGSLAALL LTWWLGGFGV LPSDREYEIW GVTIGGLVFF LIGLADDFFS LSPITRLLAQ
MTVAAGVWLV GVRIDLLTIP FVGGVYVLPE WLSLPVTVLW LVGMTNAINW IDGLDGLAAG
VSGISAVILL IVALAVQQPA AALVAAALAG GCLGFLRYNF NPAKIFMGDG GSYFIGFTLA
GVGVIGLVKS LTTFAVLLPY LILAVPMLDM VTVILDRLRS GQSPFKADKR HLHHRLLDAG
FSHRRTVVLI YGLTLCAGSW ALAFANIPSG YAYAIASTLL VIVLFWRSRQ RSRRSLP