Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_0216 |
Symbol | |
ID | 3775824 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 217948 |
End bp | 218964 |
Gene Length | 1017 bp |
Protein Length | 338 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637798622 |
Product | putative zinc-binding oxidoreductase |
Protein accession | YP_399235 |
Protein GI | 81299027 |
COG category | [C] Energy production and conversion [R] General function prediction only |
COG ID | [COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.591526 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATGTCCA ACACCATGCG AGCTGTTGTT CTGGAAATGC CGGGCGGTCC CGAGCAATTG CAGCTCCAAT CCCTGCCTTG GCCCGCGATC GCGCATCCCA GCGAGGTGTT GGTGCAGTTG CAGGCGGCAG GACTGAATCC AATCGACACA AAACTCCGGC AGCGCGGCAG TTTTGACCCC GATCGCCGAC CCGCCATTCT CGGCTGTGAT GGGGCAGGCT GGGTGGCAGC CGTTGGCAGT GCCGTCGATC GTTTTGCGGT GGGGGATGCA GTCTACTTTT GCCATGGCGG CTTAGGGCTC GAACCCGGAA CCTATGCTGA TTACGCCGTT GTCGATCAGG CCTGGCTAGC ACCCAAGCCC GAGCGGTTGA GTTTTGTCGA AGCAGCAGGC GTGCCACTGG CCCTAATCAC AGCTTGGGAA GCCCTCTACG ATCGCGGTCG CCTACAAGCG GCGCAAACGG TGTTAATCCA TGCTGGTGCC GGCGGGGTGG GGCACTTGGC AATCCAGTTA GCCAAATTGC GCGGGGCACG GGTGGCAACC ACGGTCAGTA CTCCAGAAAA AGCGGCGATC GCGGAACACT ACGGCGCGGA TTTTGTGATT CCCTACCGCG ATCGCGATTG GGTCGCCGCT GTGCTCGACT GGACCGATGG CAAAGGCGTG GATTTGGCCT TCGATACCGT GGGTGGAGCG GTGCTAGAGC AAACCTTTCC TGCCGTCCGT CTCTATGGCG ATCTGGTCAC AATTCTGGCT CCAGATGCCG CCACAAACTG GAAAGTCGCC CGCGATCGCA ATCTCCGCAT CAGTCTGGAG CTGATGTTGA CGCCCCAACT CCAGCGCGTG ACAGAAGCCC GTCAGCATCA AACCCAAATT TTGACAACGG CAAGTCGCTG GTTTGATCAA GAGCAGCTGC ATATTCACAT TGGTCAAGTT TTACCAATCT CCGAGATCAG CCAGGCTCAT CAGTTCCTAG AAAGACAGCA GGGAGCGGGC AAGATTGTGA TTGATCTAAC CGCGTAA
|
Protein sequence | MMSNTMRAVV LEMPGGPEQL QLQSLPWPAI AHPSEVLVQL QAAGLNPIDT KLRQRGSFDP DRRPAILGCD GAGWVAAVGS AVDRFAVGDA VYFCHGGLGL EPGTYADYAV VDQAWLAPKP ERLSFVEAAG VPLALITAWE ALYDRGRLQA AQTVLIHAGA GGVGHLAIQL AKLRGARVAT TVSTPEKAAI AEHYGADFVI PYRDRDWVAA VLDWTDGKGV DLAFDTVGGA VLEQTFPAVR LYGDLVTILA PDAATNWKVA RDRNLRISLE LMLTPQLQRV TEARQHQTQI LTTASRWFDQ EQLHIHIGQV LPISEISQAH QFLERQQGAG KIVIDLTA
|
| |