Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_0199 |
Symbol | |
ID | 3775807 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 200426 |
End bp | 201352 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637798605 |
Product | hypothetical protein |
Protein accession | YP_399218 |
Protein GI | 81299010 |
COG category | [S] Function unknown |
COG ID | [COG4244] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.341144 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCCGGC CATTACTGGC GACGCAACCC GACTGGAGCA GCGGACTGGA TCTGGGGCTA AATGGTCTAC CCTACGCGCT GCCGGTGCAT CCCAATCTGG TGCACTTCAC GATTGGACTG TTTGCGATCG CCCTGATCTT TGACCTGATT GCCACCAGTC ACGGGCTCTT GCAGCCGATT TACAACCTGC TGCAGATTAA ACCCGATCGC GCTGCCTACT ACGACCTAGG CTGGTGGAAC TTGCTGGCTG CTGCTCTGAT CACCTTCGTG ACCGTGGCCT TCGGCTTCTT CGAAATGCTG CTGGCTGAAC CGCCTGCCGG TGCCGTCAGT CCCTGGGGTT TACCGGCGCT GGAGACCATG TATCTGCACG GCGTCGGCGG TGTTTTTTCC CTGTTCATGA TCGTGCTGCT GACCATCTGG CGAGGGCTAG AACGCTATCG TTGGCGAGCG AGGCTCCGCG CTCAAGTCAG TTTGCGCTAC GGTGCTGTGG CCCTGCTGGT TTTAGGCTTC ATCAGCATTC AGGCCGAAAT GGGGGCACAG CTGGGCGGCA CCTTCGGCCT GCACAATACA GCAGCGCTGC ATATCAGCCA AAAACAGTCA GTAGCGACGC TGCAAACCCT GACAATTCCG CCCCGAACGG TTGGCCAAGC GCTCTCCAAT CCACCGGCTA ACTACCCCTT GCCGCGCTGG GAATTCCAAG GCGATCGCCT TTACTACGGC ATTCAATCAG TGCTGACCCT GCCAGCGGAG CTTGCCCAGC CTGAGCTGCT AACGCGGCTG AATGACCATG CGTGGTCGGC GGATGACTTC TCCCTCGTCG GAGATCAAAT CTACCTGGGC GATCGCCCGC TCCTACCAGC GGGAACTACC GGCCAAGCTC AGCTCTATCG CCTCCAAGCC GCTCTCCTCT CGTCGAGTGA CCCATGA
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Protein sequence | MIRPLLATQP DWSSGLDLGL NGLPYALPVH PNLVHFTIGL FAIALIFDLI ATSHGLLQPI YNLLQIKPDR AAYYDLGWWN LLAAALITFV TVAFGFFEML LAEPPAGAVS PWGLPALETM YLHGVGGVFS LFMIVLLTIW RGLERYRWRA RLRAQVSLRY GAVALLVLGF ISIQAEMGAQ LGGTFGLHNT AALHISQKQS VATLQTLTIP PRTVGQALSN PPANYPLPRW EFQGDRLYYG IQSVLTLPAE LAQPELLTRL NDHAWSADDF SLVGDQIYLG DRPLLPAGTT GQAQLYRLQA ALLSSSDP
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