| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_0196 |
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| Symbol | |
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| ID | 3775804 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | - |
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| Start bp | 196094 |
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| End bp | 197575 |
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| Gene Length | 1482 bp |
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| Protein Length | 493 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637798602 |
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| Product | Beta-carotene 15,15'-dioxygenase |
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| Protein accession | YP_399215 |
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| Protein GI | 81299007 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3670] Lignostilbene-alpha,beta-dioxygenase and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGCCA CTGCTTCTTC TGCCTCGACT GAGACCTTCA GCCGCGCTGA TTGGCTGCGG
GGTTACGAAT CCCAGACCGA AGAACGGGAT TACTGGATCG ACGACATCGA AGGCGAAATT
CCAGCTGAGC TAGAGGGCAC GGTCTTCCGC AACGGCCCCG GTCTGCTGGA AATTGGCGGC
CAAAGCCTGC ACCATCCCTT TGATGGCGAC GGCATGATCA GCGCGATCGC GATTCGCCAA
GGTCGCGCCT ATTTCCGCAA TCGCTACGTT CGTACCGAAG GGTTTCTGGC AGAGCAAAAG
GCGGGCAAGA TTCTCTATCG CGGCGTCTTT GGCACCCAAA AACCAGGGGG TTGGCTGGCC
AATATTTTTG ATCTCGGCCT CAAGAACATT GCCAACACCA ACATCCTCTA CTGGGGCGAT
CGCCTGCTGG CGCTCTGGGA AGCGGCGGAA CCGCACCGCC TCGATCCACA GACGCTGGAA
ACTTTTGGCC TCGATCGCTT GGATGGTTTG TTGGCCGATG GTGATCCTTT CTCGGCGCAT
CCCCGCATCG ATCCCGGCTC GGAGCGTACA GGCGGTCAAC GGCGGCTGGT CAACTTTGCT
GTCAAGACCG GCCCTTCCAG CCGCATTCGG CTCTACGAAT TTGATGAGTC AGGCCGCTGC
GTCGAGCAAC AAGAGCGGGT GATTCCGGGC TTTGCTTTCC TCCACGATTT TGCGCTGACG
CCCAACTACG CCATCTTTTT CCAAAACCCG ATTCGCTTTA ACCCGCTGCC AGCCTTGCTG
GGACAGCGGA CGGCGGGGCA ATGCTTGGCG AGCGATCGCA ACAAATCTAC CCAGATTTTG
GTGATCCCCC GCGATCCGAA AGCACCGCTG CAGACCTTTG AAACCGAGTC CTGCTTTGTC
TTCCACCATG CCAATGCCTT TGAAACGGCG GATGGCGCGA TCGTGGTTGA TTCGGTTTGC
TACGACGAGT TCCCAATGCT GGAGCCCGAT CGCAACTTTA AGGAAGTCGA TTTCGACAGC
TACCCACGCG GCGAGTTGTT CCGCTTTACG CTGCACCCTG GCCAACCTCG CGCAGAACGG
AAACTACTGG AAAGTCGCAC CTGCGAATTT CCGACCCAGC ATCCCCGCAC TGTTGGTCAG
GACGCCCGCT ACTACTACAT CGGTGCTGCC GCTGCTCCAA CTGGTAATGC GCCGCTGCAA
AGCCTGCTGA AGATCGATCT GGAAACAGGC GATCGCAAGC TCTGGACCGT TGCCCCGCGA
GGCTTTATTG GCGAGCCGCT GTTTGTACCG CGTCCCGGTG GAATTGCGGA AGATGATGGC
TGGGTTCTCA GCCTGATCTA CGATGCAGCA CGCCACAGTT CAGCACTGGT GATCCTGTCC
GCCCAGACCT TAGAGCCCTT AGCTCGCCTG AATCTCAAGC AACACATTCC CTACGGTTTG
CACGGTTGCT TCACGCCACA GTATTTCGGC CCCGAAGACT AG
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| Protein sequence | MTATASSAST ETFSRADWLR GYESQTEERD YWIDDIEGEI PAELEGTVFR NGPGLLEIGG
QSLHHPFDGD GMISAIAIRQ GRAYFRNRYV RTEGFLAEQK AGKILYRGVF GTQKPGGWLA
NIFDLGLKNI ANTNILYWGD RLLALWEAAE PHRLDPQTLE TFGLDRLDGL LADGDPFSAH
PRIDPGSERT GGQRRLVNFA VKTGPSSRIR LYEFDESGRC VEQQERVIPG FAFLHDFALT
PNYAIFFQNP IRFNPLPALL GQRTAGQCLA SDRNKSTQIL VIPRDPKAPL QTFETESCFV
FHHANAFETA DGAIVVDSVC YDEFPMLEPD RNFKEVDFDS YPRGELFRFT LHPGQPRAER
KLLESRTCEF PTQHPRTVGQ DARYYYIGAA AAPTGNAPLQ SLLKIDLETG DRKLWTVAPR
GFIGEPLFVP RPGGIAEDDG WVLSLIYDAA RHSSALVILS AQTLEPLARL NLKQHIPYGL
HGCFTPQYFG PED
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