Gene Synpcc7942_0135 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0135 
Symbol 
ID3773475 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp136016 
End bp136651 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content60% 
IMG OID637798541 
Productubiquinone/menaquinone biosynthesis methylase-like protein 
Protein accessionYP_399154 
Protein GI81298946 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.228971 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAGCA TTCTTCGTCC GCTCAGCTAC CGCTACGCTT GGCTCTACGA CACCGTGACC 
GCAATCTCGT CGGTGCCGGT GGGAGGGCCT CAACGACTCC GTCAAATCTT GATTGAGCCT
CTGACGCTAC CGCGATCGGC GCAGGTCCTC GACCTTTGCT GTGGGGGTGG GGTGACCACG
GCAGCGCTCT GTCAGCGTTT TGATAACGTG GTTGGGCTGG ATGCAGCGGC AACCGCGATC
GCACGCGCCC AAGCCCTGAC ACCGCAGGCG AGTTACGTAG TGGCTCAGGC AGAGGCGATG
CCCTTTGCAG CCAATCGTTT TGACCTGATT CAGATCAGTG TGGCGCTGCA TGAGATGACG
CCCGAGCAGC GGCAGCAAAT TTTGCAGGAA GCATGGCGGG TCCTCAAACC AGCCGGAACC
CTAGCGATTC TCGATTTGCA CCGCCCTCAC AACCCGCTGT TTTGGCCGGC GATCGTCCTC
TTCATTGAGC TGTTTGAAAC CGAGACAGCT TGGCAACTCG TCCAGTCGGA CTTGATCGCG
CAACTCCAGG CGATCGGCTT TGGGCCAATC GAAGAAAAAC TCTACAGCGG CGGCAGCCTT
CAGGCGCTTT GGGCCCGTAA ACCCGGCGAT CGCTGA
 
Protein sequence
MTSILRPLSY RYAWLYDTVT AISSVPVGGP QRLRQILIEP LTLPRSAQVL DLCCGGGVTT 
AALCQRFDNV VGLDAAATAI ARAQALTPQA SYVVAQAEAM PFAANRFDLI QISVALHEMT
PEQRQQILQE AWRVLKPAGT LAILDLHRPH NPLFWPAIVL FIELFETETA WQLVQSDLIA
QLQAIGFGPI EEKLYSGGSL QALWARKPGD R