Gene Synpcc7942_0133 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0133 
Symbol 
ID3773473 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp133915 
End bp134754 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content58% 
IMG OID637798539 
Producthypothetical protein 
Protein accessionYP_399152 
Protein GI81298944 
COG category[S] Function unknown 
COG ID[COG4735] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.632308 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.123479 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAGGAAC TGCAAATGGC GCTCAGCTTG GCCACCGAGG AAGAACTGCA CGAAATTACG 
GCGGTCCTCT TTCAACCGAA ATTCAACCCT TGGGATTACT GGCGAACGCC GCGTCCGCTT
GAGGTGGCGG CTCAGGAACC AGCCGTTTGG CGCCAGAGTA TTGAACAACG CTTTCGCTTC
CTGGCGGCGG ATGGGATCAC TGTGCTGAAG GGCGGCTGGC AGCAGCTGAG CTATCACCAA
GTTCTGATCC AGATTTGCAA ACACCAGAAG TTGCCCTATC AGCAGGCTTG GAGCAGCTTA
GAGTTAGAGT CTGAAATCTT TCTCCGCTTG GCAGAACGGC TCTGGCGTCA GTTGCCTGCC
GAACGCGGAC AAGCCCTCTG CGATCGCCTC CAGCGGGCCT TAGCTCAATC ACCCGCCGCA
ACCCGCTGGC CAGAGCTTCT TAATCATGAG ACGGTACGAC TCTGGCTGGA AGGCAGTAGT
GCGATCGCCA TCAATAGTGT GCTGCGGCCC TGGCTACTCC AACAATTGAG TCGCCAACTC
GCCCTCGAAA TCGCCCGCTA TCAACTAGCG CGAACCACCT GCCAACAACT CGGCGCCTTG
GGTTTACATT GGCCCGGACA ACTGGCACTC CAGGGTGCAA GACGGGCAGT GCTGGGCCAT
ACGATGCGCT ATGGGGCTAT GCGTTCAACC CTCGCGATTT TAGGACCGGC TCTCTGGGGC
TGGTTCCTCG CGGATCTCGG TTGGCGGGCG ATCGCTACCA ACTATGGACG AGTCATCCCG
GTGGTCTTTA CCCTGGCCCA AATTCGCTTG ATTCGGAGTG AGGTACTCGC TTGCGTATAG
 
Protein sequence
MQELQMALSL ATEEELHEIT AVLFQPKFNP WDYWRTPRPL EVAAQEPAVW RQSIEQRFRF 
LAADGITVLK GGWQQLSYHQ VLIQICKHQK LPYQQAWSSL ELESEIFLRL AERLWRQLPA
ERGQALCDRL QRALAQSPAA TRWPELLNHE TVRLWLEGSS AIAINSVLRP WLLQQLSRQL
ALEIARYQLA RTTCQQLGAL GLHWPGQLAL QGARRAVLGH TMRYGAMRST LAILGPALWG
WFLADLGWRA IATNYGRVIP VVFTLAQIRL IRSEVLACV