| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_0131 |
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| Symbol | |
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| ID | 3773471 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | - |
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| Start bp | 129670 |
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| End bp | 132495 |
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| Gene Length | 2826 bp |
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| Protein Length | 941 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637798537 |
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| Product | cyclic nucleotide-binding domain-containing protein |
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| Protein accession | YP_399150 |
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| Protein GI | 81298942 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.222865 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.40749 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGTCAC AACTGCCAGA GCAGCGAATG CATTGGATCC GCTGGATATT AACAGTGGGT
TGGCTCCTCA TTATTGCCTC TCTCTTTTAT GACCCTTGGA CGGCAAAACT CACGACTCCT
GATCATCCTT GGAGTCCACT CCGGCTCTCT GAGAGCTGTA TCCAAGTCCA AGGAAATTGC
TTATCAGAGC AACCCTATCC TTTAGGAACA ACACTCTTTT GGGGTGCGAT CGTTCCTGCT
AGTATCTTTA TTTTACTCGT GTTTGGTCAT GAGCTTTGGC GACGGATTTG TCCTCTTTCA
TTCTTATCTC AAATTCCTCG GTCTCTCGGA TGGCAGCGAC AATTTAGAAG GGAGAATAAA
AAGACTGGTA AGGTTCGCTA TGAGCTCGCC AAGGTTCGCT CGGATTCTTG GTTAGGCCGC
AATTATCCCT ACGTTCAATT CAGCTGGTTA TTTATCGGCT TATGTGGCCG AATTTTGTTT
TTCAATGCCG ATCGCCTCGT CCTAGCAGGC TGGTTGTTAT CGACCGTGGC AGCCGCGATC
GCAGTGGGCT ACTGGTACGG CGGCAAGTCT TGGTGCCAAT ATTTCTGCCC GATGGCACCT
GTTCAGTCTA TTTACAGTGA GCCAGGGGGA TTATTAGGCA GCAAAGCTCA CACCAGTGAG
CAGCTGATTA CACAGTCAAT GTGCCGCACT TTCTTGCCAG ATGGTCAGGA ACAGAGTGCC
TGCGTTGCCT GTCAAAATCC CTGCATTGAT ATTGATGCTG AACGCAACTA CTGGAATAGT
TTAAGCAAAC CTGAAACTGG CTTCATTCGC TATGGCTATG TAGGCTTAGT GATTGGCTAT
TTCGGCTATT ACTATCTCTA TGCTGGCAAC TGGAACTATT ACTTCTCTGG AGCGTGGCTA
CGACAGACAG ACCAGCTGAC CTCACTCTTT GACCCAGGAA TTTACCTATT CGGTCAAGCC
ATCAATGTTC CCAAAATCAT CGCTGTTCCT CTTATCCTGG GGATCTGTAC AGCGATCGCT
TATGGAGGGG GGCGGTGGCT AGAGAAGCGT GCAAAGTCTT ACTATCGACG ACATCCAAAA
GAATTATCAC TGGAGACGAT TCGCCATCGT ATTTTTACTC TCTGCACCTT TGGTATCTTC
AATTTCTTTT TTATCTTTGG CGGACGTCCT CTTATTCAGC TCTTTCCCTG GGCTGTGCAA
TATCTCTACG ATCTGGGATT AGTGACACTG AGTACACTTT GGCTCTACAA AACTTGGCGG
CGCAGTCCTG ATCTTTATTC CCGTGAAAAT TTAGCCAATC GATTCCGCAA GCAACTAGAA
AAGCTACAGC TCAATGTATC GCAGTTCCTC GAGGGTCGAA CCCTCAACGA TCTCAACACT
CACGAAGTCT ATATCTTGGC TAAGGTACTG CCTGGATTTA CTCGTGAGAA GCGACATCAA
GCTTACAAAG GCGTAGTCCG AGAGGCCTTA GAAGAAGGCT ACATCAACTA TTCCAGCAGC
CTAGAAGTTT TGCAGCAAAT GCGTCAGGAG CTAGGCATTA CGGATGATGA GCACCGCATC
GTCCTCGAGG AAGTTGGAAT TGAGGATCCT AGCCTACTCA ATCCTGATCG CCAACGCAGC
CTTGAGAATC AGATTCGCCT TAGTGGTTAT CGCAAATCAC TGGAACGGTT ACTGCTCCTG
CAAAGCAAAC AAGTAGCTCA GGGCTCATTG GATCCCGGAT CCTTACAGGA TTCAGCAACA
ATTCGATCGC TGCGCCGTCA GTACTCAATT ACATCTCAAG ATGAAGAGTG GATTTTGAGT
GGGCTTGCAG GCAATGCCAG CAGTGTTAAA AGAGCAGAGT TTCTGCTCGC ACAGTTATCT
CAATTAATCG ATTGCTATCG TGTCCTCAAT CAGCCAGTTC TCTATGATCA CAAGGCTGTC
CTGACCCTAT TACGGGAGAA CATCAGCCAT AAAAAGGAAT TGATCGTGCG ATCGATTTTA
GAAACCCTAG AACTGCTGCA ATCCGATCCG GCTGCGTTGG GCTTAGCTCA ACGTTTACAA
CAGGCGTCAC CAGCAATTTT AGGGGAGGTT TTAGACCAAG GGCACTGGAG CGATCGCTTA
CCCGCAGCAA TTTTGCAATG CCTGACCCAG CCCGGTGAAA TGCCTGTTTT CTGTTCCCTA
GAATTTTCGG CTCAGGCAAC GCTCGGGCAC CTAGAAACTT TGCTTCTGGA TCAGAATCCC
ATGATTCAGG CGGCGGCGCT CTACGTCATC GCCCAATTGG ATCCAGAGCG GAGTCAAGCG
ATCGCGCGTG ATCAGCGTCA CCCGTTCAAC TCCCCACTGG TGAAAGCCAC CCTTGAGCAG
CTATTAGCAT TGCCATCAAA TGCCTCTGCT CATCCATCCC TGACCGACTT CCCAATGCTG
GAGCGAGTGG TTTACCTCTT CAATAGCGAT TTCTTCCACC GCATGCAAAG TGAGACGCTC
ATTGCTCTTG CCGATCGCGC GGAAGTGAGA ACTTATAGCA AGGGAGATCT CATCACCGAA
GCAGGAGACA CCTGTCGAGA GTTACTACTG TTAATTGAAG GGCATGCCAA CGTTCATTAT
CAAACTGGAG CTGAGGTTCG AATTGAACAG CTGCATCCAG GTCAAACTCT AGATGAGTTG
GAAGTTTTAG CCCATAGCAA GTCAGAGAAT ACGATCGTGG CTGACAGTGA GAGGACTCGA
ATTCTTGCCA TTTCTGTCGA TGCCTTTGAT GACTTTCTTG ATCATGATCC AGATTTTGCT
CGACGGGTTT TGGAATTAGA AAGTCGGCAA CTCCAGCGAT TTGTGCGGTC GATGCAGTCG
ATCTAA
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| Protein sequence | MLSQLPEQRM HWIRWILTVG WLLIIASLFY DPWTAKLTTP DHPWSPLRLS ESCIQVQGNC
LSEQPYPLGT TLFWGAIVPA SIFILLVFGH ELWRRICPLS FLSQIPRSLG WQRQFRRENK
KTGKVRYELA KVRSDSWLGR NYPYVQFSWL FIGLCGRILF FNADRLVLAG WLLSTVAAAI
AVGYWYGGKS WCQYFCPMAP VQSIYSEPGG LLGSKAHTSE QLITQSMCRT FLPDGQEQSA
CVACQNPCID IDAERNYWNS LSKPETGFIR YGYVGLVIGY FGYYYLYAGN WNYYFSGAWL
RQTDQLTSLF DPGIYLFGQA INVPKIIAVP LILGICTAIA YGGGRWLEKR AKSYYRRHPK
ELSLETIRHR IFTLCTFGIF NFFFIFGGRP LIQLFPWAVQ YLYDLGLVTL STLWLYKTWR
RSPDLYSREN LANRFRKQLE KLQLNVSQFL EGRTLNDLNT HEVYILAKVL PGFTREKRHQ
AYKGVVREAL EEGYINYSSS LEVLQQMRQE LGITDDEHRI VLEEVGIEDP SLLNPDRQRS
LENQIRLSGY RKSLERLLLL QSKQVAQGSL DPGSLQDSAT IRSLRRQYSI TSQDEEWILS
GLAGNASSVK RAEFLLAQLS QLIDCYRVLN QPVLYDHKAV LTLLRENISH KKELIVRSIL
ETLELLQSDP AALGLAQRLQ QASPAILGEV LDQGHWSDRL PAAILQCLTQ PGEMPVFCSL
EFSAQATLGH LETLLLDQNP MIQAAALYVI AQLDPERSQA IARDQRHPFN SPLVKATLEQ
LLALPSNASA HPSLTDFPML ERVVYLFNSD FFHRMQSETL IALADRAEVR TYSKGDLITE
AGDTCRELLL LIEGHANVHY QTGAEVRIEQ LHPGQTLDEL EVLAHSKSEN TIVADSERTR
ILAISVDAFD DFLDHDPDFA RRVLELESRQ LQRFVRSMQS I
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