Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_0090 |
Symbol | |
ID | 3773430 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | + |
Start bp | 88735 |
End bp | 89718 |
Gene Length | 984 bp |
Protein Length | 327 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637798496 |
Product | GntR family transcriptional regulator |
Protein accession | YP_399109 |
Protein GI | 81298901 |
COG category | [K] Transcription |
COG ID | [COG1725] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTCGTT TTCACATCCA AGCCGACAGC GACATCCCTG CGTCGACACA GCTATACAAC CAGATTCACT TCGCGATCGC GTCTCGCCAG TATCCGCCGG GGCACAAGCT GCCCAGCACC CGCCAGCTAG CCATGCAGAC GGGATTGCAT CGCAACACGA TCAGCAAGGT CTATCGCCTG CTCGAAGAAG ACGGCGTTGT CGAAGCCCAG GCCGGTTCCG GCATCTATGT GCGGGGGGGC AATGACCCTC GTGAGACGGC GAAGAGTCAG CGCTTGCGCA AGCAGTATCC CGATATCGAT CAACAGATTC GTGATCACAT TGACACGTTG TTGCAGCAGG GTTGCTCCCT AGCTGAGATC CGTGAACTGT TCTTAGCAGA GGTGGATTGG CGGTTGCGCT GTAGCGCCAG CGTCCTAGTC ACAGCGCCTT TGCAAGACCT AGGAGCGGCG GAGTTGATGT ATCGGGAGCT GTCCCAAGCC TTGGGTGTGC CCGTTGAAGT GGTTCCCTTG GAAGAGTTGG GCGCCATCCT CAAACAAAAA GACAGCGGCA CTGTGGTCAC AAGCCACTAC TTCTTCCAAG ATGCCGAGGC GATTACTGCT AGCCTTGGGG CTCGCACGAT CGCGCTGGAT CTCTACGACT ATCGCGAAGA ACTCTCATTC TTGAGTCAGC AAAAGGAAGG TAGCTGCATC GGCATTGTCA GTATTAGCCC GGGCATCCTG CGGGCGGCGG AAATTATCAT CCACAGCTTG CGCGGCGAAG CACTGCTGAT CATGTCCTGT CAGCCCAATG ACCAAACCAA GTTGGAAGCG ATGCTGCGCA GTGCGTCGGT GATCATCTGC GATCAATCCA GCATTGACAA CGTCAAGCAG CGCGTCAGTG CGATTCGGGA CGACTTGATC CGCTTACCCC GTTTGCTCTG CAGCAAAAGC TACATCAGCG AGGCCTCGAT CGCTCTGCTG AAGCGGGAAC TGGGTTTGAA CTAA
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Protein sequence | MIRFHIQADS DIPASTQLYN QIHFAIASRQ YPPGHKLPST RQLAMQTGLH RNTISKVYRL LEEDGVVEAQ AGSGIYVRGG NDPRETAKSQ RLRKQYPDID QQIRDHIDTL LQQGCSLAEI RELFLAEVDW RLRCSASVLV TAPLQDLGAA ELMYRELSQA LGVPVEVVPL EELGAILKQK DSGTVVTSHY FFQDAEAITA SLGARTIALD LYDYREELSF LSQQKEGSCI GIVSISPGIL RAAEIIIHSL RGEALLIMSC QPNDQTKLEA MLRSASVIIC DQSSIDNVKQ RVSAIRDDLI RLPRLLCSKS YISEASIALL KRELGLN
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