| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_0086 |
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| Symbol | |
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| ID | 3773426 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | - |
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| Start bp | 82871 |
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| End bp | 84955 |
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| Gene Length | 2085 bp |
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| Protein Length | 694 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637798492 |
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| Product | isoamylase |
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| Protein accession | YP_399105 |
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| Protein GI | 81298897 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1523] Type II secretory pathway, pullulanase PulA and related glycosidases |
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| TIGRFAM ID | [TIGR02100] glycogen debranching enzyme GlgX |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGTTT CATCCCGTCG CCCTGAATCG ACCGTGGCTG TTGACCCCGG CCAAAGCTAT
CCCCTCGGGG CAACCGTCTA TCCCACCGGC GTCAACTTCT CGCTCTACAC CAAGTACGCG
ACGGGCGTTG AATTACTGCT GTTTGATGAC CCTGAGGGTG CCCAGCCTCA ACGGACAGTG
CGCCTCGATC CGCACCTCAA TCGCACCTCT TTCTACTGGC ATGTTTTTAT TCCGGGCATT
CGCTCCGGTC AGGTTTATGC TTACCGCGTC TTTGGCCCCT ACGCACCTGA TCGCGGCCTC
TGTTTTAACC CCAACAAAGT GCTGCTGGAT CCCTACGCTC GCGGGGTTGT CGGCTGGCAG
CACTACAGTC GCGAAGCGGC TATTAAACCC AGTAATAACT GCGTTCAAGC CCTGCGTAGC
GTGGTTGTTG ACCCCAGCGA CTACGACTGG GAAGGCGATC GCCATCCACG CACACCCTAC
GCTCGCACAG TAATCTATGA GCTGCATGTT GGCGGCTTCA CCAAGCATCC CAATTCCGGC
GTCGCCCCTG AAAAACGTGG CACCTACGCT GGTCTAATCG AAAAAATTCC CTACCTGCAA
TCCCTCGGCG TCACGGCCGT TGAGTTGCTG CCGGTGCACC AGTTCGATCG CCAAGATGCC
CCCTTAGGAC GCGAGAACTA CTGGGGCTAC AGCACCATGG CTTTTTTTGC GCCCCACGCA
GCCTACAGCT CTCGCCATGA TCCACTTGGT CCAGTTGATG AGTTCCGCGA CCTCGTCAAG
GCGCTCCACC AAGCAGGGAT TGAGGTGATT CTCGACGTGG TGTTCAACCA CACTGCTGAA
GGGAATGAAG ACGGTCCAAC GCTGTCTTTC AAAGGTCTAG CGAATTCAAC CTACTATCTG
CTGGATGAAC AGGCGGGCTA TCGCAACTAC ACCGGCTGCG GCAACACCGT CAAAGCTAAC
AATTCGATCG TGCGATCGCT GATTCTCGAT TGCCTGCGTT ATTGGGTCTC GGAAATGCAC
GTCGATGGCT TCCGCTTTGA CCTTGCGTCG GTGCTGAGTC GTGATGCCAA TGGCAACCCC
CTATCGGATC CGCCCTTGCT TTGGGCGATT GATTCCGATC CGGTTTTGGC CGGTACGAAG
CTCATTGCTG AAGCTTGGGA CGCAGCCGGC TTATATCAGG TTGGTACCTT TATTGGCGAT
CGCTTTGGGA CTTGGAACGG TCCCTTCCGG GACGATATTC GGCGTTTTTG GCGTGGAGAT
CAGGGCTGTA CTTACGCCCT CAGTCAACGC CTGCTGGGTA GCCCCGATGT CTACAGCACA
GACCAATGGT ATGCCGGACG CACCATTAAC TTCATCACCT GCCATGACGG CTTTACGCTG
CGAGATCTAG TCAGCTATAG CCAGAAGCAC AACTTTGCCA ATGGAGAGAA CAATCGGGAC
GGGACCAATG ACAACTACAG CTGGAACTAC GGCATTGAAG GCGAGACCGA TGACCCCACG
ATTCTGAGCT TACGGGAACG GCAGCAGCGC AATTTGCTCG CCACGTTATT CCTCGCCCAG
GGCACACCGA TGCTGACGAT GGGCGATGAG GTCAAACGCA GTCAGCAGGG TAACAATAAC
GCCTACTGCC AAGACAATGA GATCAGCTGG TTTGATTGGT CGCTGTGCGA TCGCCATGCC
GATTTCTTGG TGTTCAGTCG CCGCCTGATT GAACTTTCCC AGTCGCTGGT GATGTTCCAA
CAGAACGAAC TGCTGCAGAA CGAACCCCAT CCGCGTCGTC CCTATGCCAT CTGGCATGGC
GTCAAACTCA AACAACCCGA TTGGGCGCTG TGGTCCCACA GTCTGGCCGT CAGTCTCTGC
CATCCTCGCC AGCAGGAATG GCTTTACCTA GCCTTTAATG CTTACTGGGA AGACCTGCGC
TTCCAGTTGC CGAGGCCTCC TCGCGGCCGC GTTTGGTATC GCTTGCTCGA TACTTCACTG
CCGAATCTTG AAGCTTGTCA TCTGCCGGAT GAGGCAAAAC CCTGCCTACG GCGCGATTAC
ATCGTCCCAG CGCGATCGCT CTTACTGTTG ATGGCTCGTG CTTAA
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| Protein sequence | MTVSSRRPES TVAVDPGQSY PLGATVYPTG VNFSLYTKYA TGVELLLFDD PEGAQPQRTV
RLDPHLNRTS FYWHVFIPGI RSGQVYAYRV FGPYAPDRGL CFNPNKVLLD PYARGVVGWQ
HYSREAAIKP SNNCVQALRS VVVDPSDYDW EGDRHPRTPY ARTVIYELHV GGFTKHPNSG
VAPEKRGTYA GLIEKIPYLQ SLGVTAVELL PVHQFDRQDA PLGRENYWGY STMAFFAPHA
AYSSRHDPLG PVDEFRDLVK ALHQAGIEVI LDVVFNHTAE GNEDGPTLSF KGLANSTYYL
LDEQAGYRNY TGCGNTVKAN NSIVRSLILD CLRYWVSEMH VDGFRFDLAS VLSRDANGNP
LSDPPLLWAI DSDPVLAGTK LIAEAWDAAG LYQVGTFIGD RFGTWNGPFR DDIRRFWRGD
QGCTYALSQR LLGSPDVYST DQWYAGRTIN FITCHDGFTL RDLVSYSQKH NFANGENNRD
GTNDNYSWNY GIEGETDDPT ILSLRERQQR NLLATLFLAQ GTPMLTMGDE VKRSQQGNNN
AYCQDNEISW FDWSLCDRHA DFLVFSRRLI ELSQSLVMFQ QNELLQNEPH PRRPYAIWHG
VKLKQPDWAL WSHSLAVSLC HPRQQEWLYL AFNAYWEDLR FQLPRPPRGR VWYRLLDTSL
PNLEACHLPD EAKPCLRRDY IVPARSLLLL MARA
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