Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_0085 |
Symbol | |
ID | 3773425 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 82179 |
End bp | 82865 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 637798491 |
Product | HAD family hydrolase |
Protein accession | YP_399104 |
Protein GI | 81298896 |
COG category | [R] General function prediction only |
COG ID | [COG0637] Predicted phosphatase/phosphohexomutase |
TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAACTT CACCGTTTCA GCTGGTGATT TTCGACTGTG ATGGTGTGCT TGTTGATAGC GAACGCATCA CTAATCGCGT CTTTGCAGAC ATGCTCAATG AACTGGGTCT GTTGGTGACT TTGGATGACA TGTTTGAGCA GTTTGTGGGT CATTCCATGG CTGACTGTCT CAAACTAATT GAGCGACGGT TAGGCAATCC TCCACCCCCT GACTTTGTTC AGCACTATCA ACGCCGTACC CGTATCGCGT TAGAAACGCA TCTACAAGCC GTTCCTGGGG TTGAAGAGGC TTTGGATGCT CTTGAATTGC CCTACTGTGT TGCGTCCAGT GGTGATCATC AAAAGATGCG AACCACACTG AGCCTGACGA AGCTCTGGCC ACGATTTGAG GGACGAATCT TCAGCGTGAC TGAAGTACCT CGCGGCAAGC CATTTCCCGA TGTCTTTTTG TTGGCCGCCG ATCGCTTCGG GGTTAATCCT ACGGCCTGCG CTGTGATCGA AGACACCCCC TTGGGAGTAG CGGCAGGCGT GGCGGCAGGA ATGCAAGTGT TTGGCTACGC GGGTTCCATG CCCGCTTGGC GTCTGCAAGA AGCCGGTGCC CATCTCATTT TTGACGATAT GCGACTGCTG CCCAGTCTGC TCCAATCGTC GCCAAAAGAT AACTCCACAG CATTGCCCAA TCCCTAA
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Protein sequence | MQTSPFQLVI FDCDGVLVDS ERITNRVFAD MLNELGLLVT LDDMFEQFVG HSMADCLKLI ERRLGNPPPP DFVQHYQRRT RIALETHLQA VPGVEEALDA LELPYCVASS GDHQKMRTTL SLTKLWPRFE GRIFSVTEVP RGKPFPDVFL LAADRFGVNP TACAVIEDTP LGVAAGVAAG MQVFGYAGSM PAWRLQEAGA HLIFDDMRLL PSLLQSSPKD NSTALPNP
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