Gene Synpcc7942_0067 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0067 
Symbol 
ID3773784 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp67177 
End bp67986 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content58% 
IMG OID637798473 
ProductABC transporter permease 
Protein accessionYP_399086 
Protein GI81298878 
COG category[R] General function prediction only 
COG ID[COG1277] ABC-type transport system involved in multi-copper enzyme maturation, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.421472 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACGCC TTCATCTGCT GCGCGATCGC GCCGGCGTCG TTCTCTACGA ACGAGAGCTA 
CGCAGTTATT TTGGATCGCC GTTTTTTTAT GGCATTGCCG GCGCTTTTTG GCTGCTGGCA
GGTTTTTTCT TCAACGTGCA ACTGCAGAGC CTGCTCAGTC AGCTCGCTGC TTTTGACCAA
CAGGGCGGTG CCACTATCAC CCAGCCGATC GATGCCCCTT ATCTGCTGAT TCAGAACTTC
ATGGGAGTGC TGGGCTTTCT GCTGCTGTTG CTGCTGCCGA TGCTGTCGAT GGGGCTCTAC
ACCGAGGAAC GCAAACGCAC CACCTTGGAA TTGCTACTGA CGGCTCCCGT GCGGAATTGG
ACGGTGGCGA TCGCCAAGCT CCTAGCAGTG TTGACGGCCG TTGTGGGCCT CCTGCTACCA
ATCGCCCTCT ACGAAGCGAT CGCCCTTGGA TCCTCTAGCC CGGCGCTTTC GCCTTGGATC
TTCCTCTCGG GCTATGTCGG CTTACTACTC CTCGCGGCGG CTGTTCTGTC CTTAGGCATG
TTCCTGTCCT CGTTGACCGA CAGCACGGTT TTGGCTGCCA TTTTGAGCTT CCTGCTGGTG
CTGGCGCTCT GGGCCCTGGA TAGCTTGGGC GGCAGCGTGA GTGGCGCGAT CGGGGATATC
AGTCGTCATC TGTCACTGTT GCAGCAATAC AGCCAGTGGG TGGAAGGGCA GGTGAGTAGC
GCCAGCGTCA TTCTCTTTGC CAGCGCGATC GGCTTGGGCT TGTTCCTAAC AGCTCAATCC
GTGGAACTGT TGCGCGTGCG GCGAGGTTAA
 
Protein sequence
MQRLHLLRDR AGVVLYEREL RSYFGSPFFY GIAGAFWLLA GFFFNVQLQS LLSQLAAFDQ 
QGGATITQPI DAPYLLIQNF MGVLGFLLLL LLPMLSMGLY TEERKRTTLE LLLTAPVRNW
TVAIAKLLAV LTAVVGLLLP IALYEAIALG SSSPALSPWI FLSGYVGLLL LAAAVLSLGM
FLSSLTDSTV LAAILSFLLV LALWALDSLG GSVSGAIGDI SRHLSLLQQY SQWVEGQVSS
ASVILFASAI GLGLFLTAQS VELLRVRRG