Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_0062 |
Symbol | |
ID | 3773779 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 62469 |
End bp | 63242 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637798468 |
Product | glucose-1-phosphate cytidylyltransferase |
Protein accession | YP_399081 |
Protein GI | 81298873 |
COG category | [J] Translation, ribosomal structure and biogenesis [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) |
TIGRFAM ID | [TIGR02623] glucose-1-phosphate cytidylyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.191265 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGCTG TAATTTTGGC AGGTGGTCTT GGTACAAGAC TAAGTGAAGA GACTCACCTA AGACCTAAGC CAATGGTAGA AGTTGGTGGC AAACCAATTC TTTGGCATAT CCTTAAAATC TATAGTCATT TTGGCATTCA GGAATTTATT ATTTGCTGTG GTTATAAGGG CTATTTAATT AAAGATTATT TTGCCAACTA TTTTTTGTAT ACCAGTGATG TAACATTTCA TATGGATATT GATAACCATA TGGAAGTTCA TCACCGAAAA AGCGAGCCGT GGAAAGTTAC GCTTGTAGAT ACTGGCGAGA TGAGTCAGAC AGGAGGGCGG TTAGGCCGAG TTCGCCATTA TCTAAATGAC GAAACCTTCT GTTTTACCTA TGGAGATGGT GTTGCAGATG TCAATATTCA TGCACTTGTT CAACACCATC AAAAGGCAGA ATGTCAGGCA ACACTAACTG CTGTCCAGCC TCCTGGCCGT TACGGTGCCC TGAGTCTGGA AGGTGATACG GTATTGCAGT TCCAAGAGAA ACCTGAGGGT GATAACGCTT GGATTAATGG TGGCTTCTTC GTACTTGAAC CCAATGTTTT GGACTTGATT GCAGACGATA GCTGTAGCTG GGAGGGAGAA ATTTTGCCTC AACTTGCTGC TGCTGGTCAG CTCTCTGCTT ATCGGCACCG AGGTTTTTGG CAGCCAATGG ATACCTTGAG AGACCGGACT CGTTTAGAGG AGCTATGGGC TAATAATCAG GCCCCCTGGA AGCTTTGGGA ATGA
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Protein sequence | MKAVILAGGL GTRLSEETHL RPKPMVEVGG KPILWHILKI YSHFGIQEFI ICCGYKGYLI KDYFANYFLY TSDVTFHMDI DNHMEVHHRK SEPWKVTLVD TGEMSQTGGR LGRVRHYLND ETFCFTYGDG VADVNIHALV QHHQKAECQA TLTAVQPPGR YGALSLEGDT VLQFQEKPEG DNAWINGGFF VLEPNVLDLI ADDSCSWEGE ILPQLAAAGQ LSAYRHRGFW QPMDTLRDRT RLEELWANNQ APWKLWE
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