| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_0039 |
|---|
| Symbol | |
|---|
| ID | 3775852 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus elongatus PCC 7942 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007604 |
|---|
| Strand | + |
|---|
| Start bp | 37130 |
|---|
| End bp | 38545 |
|---|
| Gene Length | 1416 bp |
|---|
| Protein Length | 471 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637798444 |
|---|
| Product | 6-phosphogluconate dehydrogenase |
|---|
| Protein accession | YP_399058 |
|---|
| Protein GI | 81298850 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0362] 6-phosphogluconate dehydrogenase |
|---|
| TIGRFAM ID | [TIGR00873] 6-phosphogluconate dehydrogenase, decarboxylating |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.554725 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCACTGC AACAGTTCGG CCTCATCGGG CTGGCAGTGA TGGGTGAGAA TCTCGCCCTG
AACATTGAGC GCAACGGTTT TTCCTTGACG GTCTATAACC GCACGGCCGA AAAGACTGAA
GCGTTCATGG CCGATCGCGC CCAAGGCAAG AACATTGTGC CGGCTTACAG TCTGGAAGAC
TTTGTTGCCA GCTTGGAACG TCCGCGCCGC ATTTTGGTGA TGGTTAAAGC GGGCGGCCCG
GTGGATGCCG TGGTCGAGCA GCTCAAACCC CTGCTAGATC CCGGTGACTT GATCATCGAT
GGGGGCAACT CACTGTTTAC CGACACCGAG CGCCGCGTCA AAGATCTAGA AGCGCTAGGT
CTGGGTTTCA TGGGCATGGG CGTCAGTGGT GGCGAAGAGG GGGCTTTGAA TGGCCCCAGT
TTGATGCCGG GGGGCACCCA AGCGGCCTAC GAAGCCGTGG AGCCGATCGT GCGCAGCATT
GCTGCCCAAG TCGACGATGG CCCCTGCGTT ACCTACATCG GTCCTGGTGG CTCTGGGCAC
TACGTCAAGA TGGTGCACAA CGGCATTGAA TATGGCGATA TGCAGCTGAT CGCCGAAGCC
TATGACCTCC TCAAATCGGT GGCAGGCCTC AATGCCAGTG AACTGCATGA TGTCTTCGCC
GCCTGGAACA AAACGCCGGA ACTCGACTCG TTCTTGATTG AAATCACGGC GGATATTTTC
ACCAAAGTCG ATGACTTGGG TACTGGTCAG CCCTTGGTCG AGCTGATTTT AGATGCCGCT
GGTCAAAAAG GAACCGGTCG CTGGACGGTG GAAACGGCAC TGGAAATTGG CGTTGCGATT
CCAACCATCA TTGCTGCTGT CAACGCCCGC ATCCTGTCCT CGATCAAAGC CGAGCGTCAG
GCAGCTTCTG AAATTCTTTC AGGACCGATT ACCGAGCCCT TCAGTGGCGA TCGCCAAGCC
TTTATCGACA GTGTGCGCGA TGCGCTCTAC TGCTCGAAAA TTTGCTCCTA TGCCCAAGGC
ATGGCGCTGC TAGCCAAAGC CTCCCAGGTC TACAACTACG GTCTGAATTT AGGTGAACTG
GCGCGGATTT GGAAAGGCGG CTGCATCATT CGGGCGGGTT TCCTCAACAA GATTAAGCAG
GCCTATGATG CTGACCCAAC GCTGGCGAAT CTGTTGCTGG CACCCGAATT CCGGCAGACG
ATTCTCGATC GCCAGTTGGC TTGGCGGCGC GTGATTGCGA TCGCGGCAGA ACGAGGAATT
CCGGTTCCGG CTTTCAGTGC TTCCCTGGAT TACTTCGACA GCTACCGGCG CGATCGCCTG
CCCCAAAACC TCACCCAGGC TCAGCGCGAC TACTTCGGCG CTCATACCTA CGAACGCACC
GATCGCTCTG GCTCTTTCCA TGCCCAGTGG TTCTAG
|
|---|
| Protein sequence | MALQQFGLIG LAVMGENLAL NIERNGFSLT VYNRTAEKTE AFMADRAQGK NIVPAYSLED
FVASLERPRR ILVMVKAGGP VDAVVEQLKP LLDPGDLIID GGNSLFTDTE RRVKDLEALG
LGFMGMGVSG GEEGALNGPS LMPGGTQAAY EAVEPIVRSI AAQVDDGPCV TYIGPGGSGH
YVKMVHNGIE YGDMQLIAEA YDLLKSVAGL NASELHDVFA AWNKTPELDS FLIEITADIF
TKVDDLGTGQ PLVELILDAA GQKGTGRWTV ETALEIGVAI PTIIAAVNAR ILSSIKAERQ
AASEILSGPI TEPFSGDRQA FIDSVRDALY CSKICSYAQG MALLAKASQV YNYGLNLGEL
ARIWKGGCII RAGFLNKIKQ AYDADPTLAN LLLAPEFRQT ILDRQLAWRR VIAIAAERGI
PVPAFSASLD YFDSYRRDRL PQNLTQAQRD YFGAHTYERT DRSGSFHAQW F
|
|---|
| |