Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_0013 |
Symbol | |
ID | 3774233 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | + |
Start bp | 12321 |
End bp | 13028 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 637798418 |
Product | hypothetical protein |
Protein accession | YP_399032 |
Protein GI | 81298824 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.179717 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.125141 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGCCA ACGCGTTGGA TACCAAGGGT CAGCAGAGAG CCTTACGTCT TTCCAGTCTG CTCCAAGAGA TTCGTGCCAA CTTGGTTGGT CGTGCTTTGC CGGCTCGTGC TGAAGTTCTG GTGCATGAAA GCTTATCGAA ACGAAAGCTC TCAAGATTAC TCGGGGTCTC AGCTACGCTT ATCAATAAAT ATGAGGGGAG TGAGATTGAT CCTTGGGATA TTCGCTGGAG TTTAATGCGT CGAATTTCTC GACTGGCTAA TCTTTCGCTG GAACAACTCG ATGCCGTTCT TAGTGGCGAA GCAACAGCGG ATGGACAAGG GCGTCCTCTG GAGCAAGACC CCCACGATGT CTTGCTCTCT CTGCGGCAGT TGATTGAACA GTTAGAAGTT CACATTCAAG CCCGGGAGTC GAGTACCTCA GCTGATGCGC CGGTACCTTG GTTTGGACGT TATCTGCGGA CCTTATTGGC CGACCAAGCG CAAGAGTCTG GGCAAAAATT GGAGACAGTT ATCCAAGCCT TCATTCAGGC GCTGCCGAGT GTGGCACCCG ATCAAGCCCA GGCGCTGAAA GCGGTCTTAG AGAATAAGGC TGATTTCACG CGGCAGCAAG TCCAAGAAAA CTGTGCTGCG ATCGCGACAG CCCTAAGTGC AGTGATTGAA GTCCCGGTCA CCCCGAGCCA ATTGCTGGCC ATGCTGCCCG ATCAATAG
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Protein sequence | MSANALDTKG QQRALRLSSL LQEIRANLVG RALPARAEVL VHESLSKRKL SRLLGVSATL INKYEGSEID PWDIRWSLMR RISRLANLSL EQLDAVLSGE ATADGQGRPL EQDPHDVLLS LRQLIEQLEV HIQARESSTS ADAPVPWFGR YLRTLLADQA QESGQKLETV IQAFIQALPS VAPDQAQALK AVLENKADFT RQQVQENCAA IATALSAVIE VPVTPSQLLA MLPDQ
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