| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_0004 |
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| Symbol | |
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| ID | 3774224 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus elongatus PCC 7942 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007604 |
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| Strand | + |
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| Start bp | 4596 |
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| End bp | 6077 |
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| Gene Length | 1482 bp |
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| Protein Length | 493 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637798409 |
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| Product | amidophosphoribosyltransferase |
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| Protein accession | YP_399023 |
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| Protein GI | 81298815 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0034] Glutamine phosphoribosylpyrophosphate amidotransferase |
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| TIGRFAM ID | [TIGR01134] amidophosphoribosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.645305 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.0907172 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCCGA CTCAGCCGCT GACCGCCGAC CTGGATTGCG ATTTGGGCCT GGAGCGACCT
GACCGCCCCG AAGAAGCCTG TGGGGTTTTT GCCCTCTACG CACCGGGCGA AGAAGTGGCG
CGCATGGCCT ATTTCGGGCT GTACGCGCTC CAGCATCGTG GACAAGAGTC TGCTGGCATC
GCCGTCTTTG AAGGCGATCG CGTCATGCTC CACAAGGACA TGGGCTTGGT CTCCCAAGTC
TTTGATCCCG AAATCCTGCA GCAACTGCAA GGCAGCCTTG CGGTCGGTCA TACCCGCTAC
TCCACCACGG GATCAAGCCG TATTGCCAAC GCTCAACCGG CGTTGCTGGA AACCCGCCTT
GGGCCGGTGG CCTTGGCGCA CAACGGCAAC TTGGTCAACA CGGTTGAGTT GCGCCAAGAG
CTGCTAGCTA AGAACCACGA GCTGACGACC ACCACCGATT CAGAACTGAT TGCCTTCGCG
ATCATGGAAG CAGTGGCAGA AGGCCAGGAC TGGCGCGGGG CGATCGAGTC TGCCTGCCGC
CGCAGCCAAG GAGCCTTTAG CCTGACGATC GGCACTCCTG AGGCACTCTA CGGCACCCGT
GACCCCAATG GCATTAGGCC GCTTGTGCTG GGCACGCTGG AGAGCAATGG CCAAACGCGC
TATGTGCTTT CTTCTGAAAC CTGCGGTCTC GACATCATTG GTGCGGACTA CGTGCGCGAT
ATCGCACCGG GTGAAATGGT GCGGATTACA GATGCAGGTC TGGAAAGCTG GACTTGGGCC
GAGGCGCCGC AGCCGAAGCT CTGCGTCTTC GAGATGATTT ACTTTGCGCG GCCTGATAGC
CTCTTTCACG GCGAGTCGCT TTACAGCTAT CGCCGCCGCA TCGGCCAACG CTTAGCCAAG
GAAGCTCCGG CGGATGTTGA CCTCGTGCTG GGTGTGCCTG ACTCCGGTAT TCCGGCTGCG
ATTGGTTTTT CTGAAGCGCT GGGCATTCCC TACGCCGAAG GGTTAATCAA AAACCGCTAC
GTGGGGCGGA CGTTCATCCA GCCCACCCAA TCGATGCGGG AAACGGGCAT TCGCATGAAG
CTCAACCCTC TCAAGGATGT CTTAGCGGGC AAACGCATTG CCATCATTGA CGATTCGATC
GTGCGGGGAA CAACCAGCCG CAAACTGGTC AAAGCTCTGC GGGATGCGGG TGCAACGGAA
GTGCATATGC GGATTTCTTC ACCGCCTGTG ACGCATCCCT GCTTCTACGG CATTGATACC
GACACCCAAG ATCAGCTGAT TGCTGCCACG CGATCGGTCA GTGAAATCAC TGAGCAGATT
GGTGTCGATT CTCTGGCTTA CCTGACGGAG CAGGGAATGC TGGAGGCGAC CCGAGAAAGT
ATTGGTAACT TCTGCACGGC TTGCTTTAAC GGTCGCTACC CGATCGCAAT TCCCGAGGAG
ATCAAGCGAT CGAAGCTGAT GCTCGAAACT GTAACGGCCT AA
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| Protein sequence | MIPTQPLTAD LDCDLGLERP DRPEEACGVF ALYAPGEEVA RMAYFGLYAL QHRGQESAGI
AVFEGDRVML HKDMGLVSQV FDPEILQQLQ GSLAVGHTRY STTGSSRIAN AQPALLETRL
GPVALAHNGN LVNTVELRQE LLAKNHELTT TTDSELIAFA IMEAVAEGQD WRGAIESACR
RSQGAFSLTI GTPEALYGTR DPNGIRPLVL GTLESNGQTR YVLSSETCGL DIIGADYVRD
IAPGEMVRIT DAGLESWTWA EAPQPKLCVF EMIYFARPDS LFHGESLYSY RRRIGQRLAK
EAPADVDLVL GVPDSGIPAA IGFSEALGIP YAEGLIKNRY VGRTFIQPTQ SMRETGIRMK
LNPLKDVLAG KRIAIIDDSI VRGTTSRKLV KALRDAGATE VHMRISSPPV THPCFYGIDT
DTQDQLIAAT RSVSEITEQI GVDSLAYLTE QGMLEATRES IGNFCTACFN GRYPIAIPEE
IKRSKLMLET VTA
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