Gene Syncc9902_2299 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_2299 
Symbol 
ID3743453 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp2209734 
End bp2211008 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content59% 
IMG OID637772501 
Producthypothetical protein 
Protein accessionYP_378300 
Protein GI78185866 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3307] Lipid A core - O-antigen ligase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.590409 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGAAAGC TCTCTGGAGG CCAGACATTT CGATTGGGCA TGTTTTTGCT TCCCTCCAGT 
GCTCTGTTGG GGGGGCTCTG CTTTCTGGTG GCTTGCATCA GCGGCAGCCA AGGCCGTGAG
CAGCCGATCT GGCGCGATCC ATGGACGCAG CCTTTGTTGT TGGCTGGTTT GCTGATGTTG
GGGGGGGCTT GTTTTGCCCA GTCAGGAGCT TTGGCCTGGG CGGGCCTGGC CAATTGGCTG
CCCTTCTTTT GGGCTTACTG GGCTTGTCGA CCTCACCTCG AGACGGTGAA ACAACGTCGT
CAGGCGGCTT GGATGCTCGT GGCCGGCACG GTGCCTGTCG TGGTCACAGG GTTCGGGCAG
ATGCTGTTGG GTTGGTCTGG TCCTTGGCAA CTCGGGGGTG GCGCGATTGT TTGGTTTGTT
GCTCCTGGAG GAGAACCCAG TGGCCGTCTT TCTGGCTTAT TTGATTACGC CAACATTGCT
GGGGCTTGGT TAGGGGTGGT GTGGCCTCTG ATGTTGGCGT GTGTGCTCCG ACCAGATGGT
TGGTGGCGGC GTAGTGGTGC ATTGGCCTTA GCCCTGTCGA CGGCTGTTGC GGTGTTGTTT
ACCCAGTCCA GAAATGCCAT GGGCGCTCTT GCCCTTGCGT TGCCATTGGT GGTCGGGCCA
TTGCAGTGGA CTTGGCTGCT GCCGCTTTTG GCGGTGTTAA CCGTGCCCTT GGCTTTGGCG
GTGTTGCCGG GCATTCCGAT CGGTTTAAAA AGTTGGTCCG TTGCCCTCTT GCCTGATCGC
ATTGCAGAGC GCCTGTTGGA TCAAGGAACG CCGACGGCTT GGAAGCACAC CCGCCTAGGC
CAGTGGGTTT ATGGCATCGA ACTGGTGGCG GCCCGCCCTT GGTTCGGATG GGGTGCGGCT
GCGTTCAGCG TGCTGTACCC CATCTATGCG GCGAAACGGT GGCATGGCCA TTCCCATAAT
TTGCCGCTGG AGTTGGCGAT CAGTCATGGG TTGCCGGTAG CTGTTCTGAT TGTTGGCACG
GTGTTTCTCC TGTTGGTCGT TGCGCTGAAA CGTGGAATAT TGCGGCGAGA CCCGCTCGAG
CGGGCTTGGT GGGCGGCCGC GCTCGTGATG GTGATGATGC ATGCCACCGA TCTGCCACTG
TTTGACAGCA GGATGAACAT TCTTGGCTGG GTGTTGCTCG CTGGATTGGC GAACGTCAGT
CAACCGTCAG TCAGTCAACC GTCAAAGCTT GATCGTGATG CTCTCGCAAT TTCTGGGGAG
CCAGCGGACC TCTGA
 
Protein sequence
MRKLSGGQTF RLGMFLLPSS ALLGGLCFLV ACISGSQGRE QPIWRDPWTQ PLLLAGLLML 
GGACFAQSGA LAWAGLANWL PFFWAYWACR PHLETVKQRR QAAWMLVAGT VPVVVTGFGQ
MLLGWSGPWQ LGGGAIVWFV APGGEPSGRL SGLFDYANIA GAWLGVVWPL MLACVLRPDG
WWRRSGALAL ALSTAVAVLF TQSRNAMGAL ALALPLVVGP LQWTWLLPLL AVLTVPLALA
VLPGIPIGLK SWSVALLPDR IAERLLDQGT PTAWKHTRLG QWVYGIELVA ARPWFGWGAA
AFSVLYPIYA AKRWHGHSHN LPLELAISHG LPVAVLIVGT VFLLLVVALK RGILRRDPLE
RAWWAAALVM VMMHATDLPL FDSRMNILGW VLLAGLANVS QPSVSQPSKL DRDALAISGE
PADL