Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9902_2299 |
Symbol | |
ID | 3743453 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9902 |
Kingdom | Bacteria |
Replicon accession | NC_007513 |
Strand | - |
Start bp | 2209734 |
End bp | 2211008 |
Gene Length | 1275 bp |
Protein Length | 424 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637772501 |
Product | hypothetical protein |
Protein accession | YP_378300 |
Protein GI | 78185866 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3307] Lipid A core - O-antigen ligase and related enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.590409 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGAAAGC TCTCTGGAGG CCAGACATTT CGATTGGGCA TGTTTTTGCT TCCCTCCAGT GCTCTGTTGG GGGGGCTCTG CTTTCTGGTG GCTTGCATCA GCGGCAGCCA AGGCCGTGAG CAGCCGATCT GGCGCGATCC ATGGACGCAG CCTTTGTTGT TGGCTGGTTT GCTGATGTTG GGGGGGGCTT GTTTTGCCCA GTCAGGAGCT TTGGCCTGGG CGGGCCTGGC CAATTGGCTG CCCTTCTTTT GGGCTTACTG GGCTTGTCGA CCTCACCTCG AGACGGTGAA ACAACGTCGT CAGGCGGCTT GGATGCTCGT GGCCGGCACG GTGCCTGTCG TGGTCACAGG GTTCGGGCAG ATGCTGTTGG GTTGGTCTGG TCCTTGGCAA CTCGGGGGTG GCGCGATTGT TTGGTTTGTT GCTCCTGGAG GAGAACCCAG TGGCCGTCTT TCTGGCTTAT TTGATTACGC CAACATTGCT GGGGCTTGGT TAGGGGTGGT GTGGCCTCTG ATGTTGGCGT GTGTGCTCCG ACCAGATGGT TGGTGGCGGC GTAGTGGTGC ATTGGCCTTA GCCCTGTCGA CGGCTGTTGC GGTGTTGTTT ACCCAGTCCA GAAATGCCAT GGGCGCTCTT GCCCTTGCGT TGCCATTGGT GGTCGGGCCA TTGCAGTGGA CTTGGCTGCT GCCGCTTTTG GCGGTGTTAA CCGTGCCCTT GGCTTTGGCG GTGTTGCCGG GCATTCCGAT CGGTTTAAAA AGTTGGTCCG TTGCCCTCTT GCCTGATCGC ATTGCAGAGC GCCTGTTGGA TCAAGGAACG CCGACGGCTT GGAAGCACAC CCGCCTAGGC CAGTGGGTTT ATGGCATCGA ACTGGTGGCG GCCCGCCCTT GGTTCGGATG GGGTGCGGCT GCGTTCAGCG TGCTGTACCC CATCTATGCG GCGAAACGGT GGCATGGCCA TTCCCATAAT TTGCCGCTGG AGTTGGCGAT CAGTCATGGG TTGCCGGTAG CTGTTCTGAT TGTTGGCACG GTGTTTCTCC TGTTGGTCGT TGCGCTGAAA CGTGGAATAT TGCGGCGAGA CCCGCTCGAG CGGGCTTGGT GGGCGGCCGC GCTCGTGATG GTGATGATGC ATGCCACCGA TCTGCCACTG TTTGACAGCA GGATGAACAT TCTTGGCTGG GTGTTGCTCG CTGGATTGGC GAACGTCAGT CAACCGTCAG TCAGTCAACC GTCAAAGCTT GATCGTGATG CTCTCGCAAT TTCTGGGGAG CCAGCGGACC TCTGA
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Protein sequence | MRKLSGGQTF RLGMFLLPSS ALLGGLCFLV ACISGSQGRE QPIWRDPWTQ PLLLAGLLML GGACFAQSGA LAWAGLANWL PFFWAYWACR PHLETVKQRR QAAWMLVAGT VPVVVTGFGQ MLLGWSGPWQ LGGGAIVWFV APGGEPSGRL SGLFDYANIA GAWLGVVWPL MLACVLRPDG WWRRSGALAL ALSTAVAVLF TQSRNAMGAL ALALPLVVGP LQWTWLLPLL AVLTVPLALA VLPGIPIGLK SWSVALLPDR IAERLLDQGT PTAWKHTRLG QWVYGIELVA ARPWFGWGAA AFSVLYPIYA AKRWHGHSHN LPLELAISHG LPVAVLIVGT VFLLLVVALK RGILRRDPLE RAWWAAALVM VMMHATDLPL FDSRMNILGW VLLAGLANVS QPSVSQPSKL DRDALAISGE PADL
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