Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9902_2175 |
Symbol | |
ID | 3742667 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9902 |
Kingdom | Bacteria |
Replicon accession | NC_007513 |
Strand | + |
Start bp | 2079374 |
End bp | 2082565 |
Gene Length | 3192 bp |
Protein Length | 1063 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637772373 |
Product | DEAD/DEAH box helicase-like |
Protein accession | YP_378176 |
Protein GI | 78185742 |
COG category | [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCCTGC TGCACGCCAC CTGGCTTCCC GCCATTCGTA CTTCCAGCAG TTCCGGACAG CCGGCACTGC TCATTTGGGC TGACACCTGG CGTGTCGCCT CACCGGAGGG GCCCGGACTC ACACCCGCTC TGCATCCCTT CACCCTTGGC TCGGACGATC TCAAAGCTTG GTTGACCGAA CGGGACCTGA TGCCTGGGGG CAGCATCGAT GCCACCGCCT GCCTCACCCT CCCAAGCCGC AGCGTCAAAC CCCGCAAAAG TCGAACCCAA CCGAGCGAAC CAGCCCCAGA GGGACCGGCC TGGACCGGAT TGCCAATGCA AGCAGGAGAG CCCATTCCGA AGCAAATGGA ATGGTGGCCC TGGCAGGTAC AAGGCCTCGC GGTGGAGCCA TCGGCCGCAA CGGAATGGCT CGCCCGTTTA CCCCTATCGG GCCGACATCC AGACCTCGGA GATGAATTGC GCTGGTGGAG CCATCTCCAA CGTTGGTCCC TCAGCTTGGT GGCCCGGGGG CGCTGGATTC CCCAGATGGA ATTAAGCAAA GGCGAGGGTT ACCCCCACCG AGCGCGCTGG GTTCCCTTGT TGAACCGTGA GGAAGATCGA CGACGGCTCG AAGACCTCGC GGCCACGCTG CCCCTCGTGG CGACCTGTGC CCTCCCTTGG CGTGAGCCAC TTGGACGCCG TAGCAACCGC ACCACCAGGC TTCGACCGGA AGCGATGCGA GCCGCCAACC CGGTGGCTTG CTGCCGCCCC CGGAGCGGTC GCCTCAGGGT GGCCACCTTG CTTGAAGACT TGGTGGATGC AGAGCTGCGC AAGGGATTTG AACCCACCAC AGAGGGGCTC GACCCCCTAC TCACCCTGTG GCAAGAGGCC CTGGCCTCAG AAACCGGTGT TGTGGAGGTG GGCAACGAGG ATGCAGAACG CCTTACCGCG GCAAGCCTGC ACTGGCGCGA AGGGATTGCC GGAGGCTTCG CTGCTGCCCG CACCTGCCTC GAACTAAACA CCCCAAACGA AGGCGAAGAA CTCTGGGACC TGAAGTTTGG CTTGCAAGCG GAGGCCGATC CCAGCCTCAA GCTGCCGGCC GCCGCGGCCT GGGCCTCAGG AGCCGAAACA CTCCAGCTCG GGGAGATCAA AGTTGACCAG GCGGGGGAAG TGCTGCTGGA GGGTCTTGGC CGAGCCCTCA CGGTGTTCCC TCCGATCGAA CGCGGACTGG AAAGCGCAAC GCCAGAAACG ATGCAGCTCA CGCCAGCGGA GGCGTTTGTC TTGGTGCGAA CAGCAACGCA CCAGCTCCGC AATGCCGGCA TCGGCGTCGA ACTGCCCCCC AGCCTTTCAG GGGGCCTCGC CAGCCGGCTT GGTTTAGCCA TCAAGGCAGA TTTACCAGAT CGATCCAGCG GCTTCACCCT CGGAGAATCT CTGGACTGGA GCTGGGATCT GATGATCGGC GGCGTCACAC TCACCCTGCG AGAGCTCGAA CGGCTCAGCG GTAAGCGCAG TCCGCTTGTG CGCCACAAGG GAGCCTGGAT CGAACTGCGA CCCAACGATC TCCGCAACGC CGAACGCTTC TGTGGAGCCA ATCCAGAACT GAGCCTCGAC GATGCCCTAA GGCTCACGGC CACAGAAGGG GAGCTAATGA TGCGCTTGCC GGTGCATCGC TTTGATGCGG GGCCTCGGCT TCAGGGAGTT CTCGAGCAAT ATCACCAGCA AAAAGCCCCC GATCCCCTTC CCGCTCCAGA GGGATTTTCC GGACAACTGC GTCCTTATCA AGAACGTGGC TTGGGCTGGC TGGCCTTCTT ACATCGCTTC GATCAAGGCG CCTGCCTGGC GGACGACATG GGCTTGGGCA AGACCATCCA ATTGTTGGCC TTCCTGCAGC ACCTCAAAGC CGAGCACGAA CTCAAACGCC CGGTGCTGTT GGTGGCCCCA ACCTCGGTGC TCACGAATTG GCGACGGGAG GCGGAAGCCT TCACCCCCGA GCTGTCGGTG AAAGAGCACT ACGGCCCACG CCGGCCTTCC ACGCCGGCCG CCTTGAAAAA AGAACTCAAA GATGTGGATC TGGTGCTCAC CAGTTACGGC CTGATGCAAC GCGACAGCGA GCTGCTGGAC AGCGTCGACT GGCAAGGGGT TGTGATCGAC GAAGCGCAGG CGATCAAAAA CCCTGGGGCG AAACAAAGCC AAGCAGCCCG AGACCTGGCC CGAGCTGGAA AGAGCAGCAG GTTCCGCATC GCACTCACCG GCACACCGGT GGAAAACCGC GTCAGCGAGC TGTGGGCGCT GATGGATTTC CTCAACCCAA AGGTGTTGGG AGAGGAAGAC TTCTTTCGTC AGCGCTACCG CATGCCAATT GAGCGCTACG GCGATATGTC GTCGTTACGC GATCTCAAAG CGCGGGTCGG CCCCTTCATC CTGCGCCGTC TCAAAACCGA CAAGTCGATC ATTTCCGACC TGCCTGAAAA GGTGGAGCTC AGTGAATGGG TGGGTCTCAG CAAAGAACAG AAATCGCTGT ACAACAAAAC CGTTGAAGAC ACCCTCGACG CCATTGCCAC CGCACCGCGG GGGCAACGCC ATGGCCAGGT GCTAGCCCTC TTGACCCGGT TAAAGCAGAT TTGCAATCAC CCGGCTTTAG CCCAACGCGA AGGGGCCGTT GACAGCGAAT TCCTTGGCCG TTCCGCCAAG CTGATGCGAC TCGAAGAAAT CCTCGAAGAG GTGATTGAAG CCGGCGATCG CGCTTTGCTA TTCACCCAAT TCGCCGAATG GGGGCATCTC CTGCAGGCCT GGATGCAACA ACGCTGGAAG TCTGAGGTTC CCTTCCTGCA CGGCGGAACC CGCAAGAGTG ATCGGCAAGC GATGGTGGAT CGATTCCAAG AGGACCCCCG GGGACCTCAA CTCTTTCTTC TGTCCCTCAA GGCCGGTGGT GTAGGCCTCA ACCTCACCCG GGCCAGTCAT GTGTTCCACG TCGATCGCTG GTGGAATCCA GCGGTGGAAA ACCAAGCCAC CGACCGGGCC TATCGAATTG GTCAAACCAA CCGGGTAATG GTGCACAAAT TCGTCACCCG TGGCTCGGTG GAAGAAAAAA TCGACCAAAT GATTCGTGAA AAAGCTCGAA TGGCTGAAGA CGTGATCGGC TCCGGTGAAG ACTGGCTCGG GAGCCTTGGC GGCGATCAGC TGCGCAATCT TGTTGCCCTC GAGGACACCT AA
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Protein sequence | MSLLHATWLP AIRTSSSSGQ PALLIWADTW RVASPEGPGL TPALHPFTLG SDDLKAWLTE RDLMPGGSID ATACLTLPSR SVKPRKSRTQ PSEPAPEGPA WTGLPMQAGE PIPKQMEWWP WQVQGLAVEP SAATEWLARL PLSGRHPDLG DELRWWSHLQ RWSLSLVARG RWIPQMELSK GEGYPHRARW VPLLNREEDR RRLEDLAATL PLVATCALPW REPLGRRSNR TTRLRPEAMR AANPVACCRP RSGRLRVATL LEDLVDAELR KGFEPTTEGL DPLLTLWQEA LASETGVVEV GNEDAERLTA ASLHWREGIA GGFAAARTCL ELNTPNEGEE LWDLKFGLQA EADPSLKLPA AAAWASGAET LQLGEIKVDQ AGEVLLEGLG RALTVFPPIE RGLESATPET MQLTPAEAFV LVRTATHQLR NAGIGVELPP SLSGGLASRL GLAIKADLPD RSSGFTLGES LDWSWDLMIG GVTLTLRELE RLSGKRSPLV RHKGAWIELR PNDLRNAERF CGANPELSLD DALRLTATEG ELMMRLPVHR FDAGPRLQGV LEQYHQQKAP DPLPAPEGFS GQLRPYQERG LGWLAFLHRF DQGACLADDM GLGKTIQLLA FLQHLKAEHE LKRPVLLVAP TSVLTNWRRE AEAFTPELSV KEHYGPRRPS TPAALKKELK DVDLVLTSYG LMQRDSELLD SVDWQGVVID EAQAIKNPGA KQSQAARDLA RAGKSSRFRI ALTGTPVENR VSELWALMDF LNPKVLGEED FFRQRYRMPI ERYGDMSSLR DLKARVGPFI LRRLKTDKSI ISDLPEKVEL SEWVGLSKEQ KSLYNKTVED TLDAIATAPR GQRHGQVLAL LTRLKQICNH PALAQREGAV DSEFLGRSAK LMRLEEILEE VIEAGDRALL FTQFAEWGHL LQAWMQQRWK SEVPFLHGGT RKSDRQAMVD RFQEDPRGPQ LFLLSLKAGG VGLNLTRASH VFHVDRWWNP AVENQATDRA YRIGQTNRVM VHKFVTRGSV EEKIDQMIRE KARMAEDVIG SGEDWLGSLG GDQLRNLVAL EDT
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