| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_2132 |
|---|
| Symbol | |
|---|
| ID | 3741919 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus sp. CC9902 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007513 |
|---|
| Strand | - |
|---|
| Start bp | 2031008 |
|---|
| End bp | 2032000 |
|---|
| Gene Length | 993 bp |
|---|
| Protein Length | 330 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637772330 |
|---|
| Product | asparaginase |
|---|
| Protein accession | YP_378133 |
|---|
| Protein GI | 78185699 |
|---|
| COG category | [E] Amino acid transport and metabolism
[J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0252] L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D |
|---|
| TIGRFAM ID | [TIGR00520] L-asparaginases, type II |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACCGCT TGCTGCTGCT GGCCACCGGC GGCACCATCG CCGGCTGTGC AGACGACAGT
GCAACGCTGA ATGATTACAC CGCTGGCGTG CTCGGGGGTG ACGCCCTGCT TGCAGCGGTG
CCGCAGCTGC AGGACCTGGC GACGATCACG GTGGAGCAGG TCGCCAATGT CGACAGCGCC
GACCTGCTGT TTGAGCACTG GCGCGCGCTG GTGGCGCGCA TTCGGGATGC CTTTGCAGCA
GACCCCGAGT TGGTCGGGAT GGTGATCACC CATGGCACGA ACACGCTGGA GGAAACCGCT
TGGTTGCTGC AGCTGTTGAT CGACGATCCC CGCCCCGTTG TGCTGGTGGG AGCGATGCGG
CCGGCCACCG CTCTCAGTGC CGATGGGCCG TTGAATCTGT TGCAGGCCGT GCAAGTGGCC
TTGAGCCCAG TAGCCCGCGG CTATGGCGTG TTGGTGGTGA TGGATGGCCA GATCCATGGA
GCCCAGCGCG TCACCAAGGC TGCAACCCAG GGGGTCGGTG CCTTTGCGAG TCCCGGCAGC
GGGCCCTTGG GCCGAGTGGA CGACTTTGGC GTTCATCTGC CAATGGCGAG CGGATCTTGG
CAGGTGCCCT TCGCAGGGCT CGCGTTACCC GAGCAATGGC CGCAGGTGCC GATCGTTTAC
GGCTCTGTGG AGCCAGAGCC GCTCTTGCTC ACCGCATGTC TCAACGCCCG TGTTCCGGGC
CTGGTGTTCA CCGGCACTGG TGCGGGTCAG CTGTCGGCGG CTGAGCGTTC TGCTCTTCAG
GCTTGGTCAG GGAAGCGGCC CCTGATGCTG CGGGCCAACC GCTGCGGGTC TGGCCCCGTG
CAAAGCCATT CCGATGATGA ACGGCTCGGG CTGCTGTCCG CAGGCAGCCT TAACCCGCAG
AAAGCACGGG TTCTGCTGTT GTTGTGTCTT CTTGCCGAGG TAGATCGCGG TGGTTTATCG
GCTCGGTTGC TCAAGCTCGA GCCAGTGAAT TGA
|
|---|
| Protein sequence | MNRLLLLATG GTIAGCADDS ATLNDYTAGV LGGDALLAAV PQLQDLATIT VEQVANVDSA
DLLFEHWRAL VARIRDAFAA DPELVGMVIT HGTNTLEETA WLLQLLIDDP RPVVLVGAMR
PATALSADGP LNLLQAVQVA LSPVARGYGV LVVMDGQIHG AQRVTKAATQ GVGAFASPGS
GPLGRVDDFG VHLPMASGSW QVPFAGLALP EQWPQVPIVY GSVEPEPLLL TACLNARVPG
LVFTGTGAGQ LSAAERSALQ AWSGKRPLML RANRCGSGPV QSHSDDERLG LLSAGSLNPQ
KARVLLLLCL LAEVDRGGLS ARLLKLEPVN
|
|---|
| |