Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9902_2120 |
Symbol | |
ID | 3742769 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9902 |
Kingdom | Bacteria |
Replicon accession | NC_007513 |
Strand | + |
Start bp | 2021272 |
End bp | 2022699 |
Gene Length | 1428 bp |
Protein Length | 475 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637772318 |
Product | isochorismate synthase |
Protein accession | YP_378121 |
Protein GI | 78185687 |
COG category | [H] Coenzyme transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1169] Isochorismate synthase |
TIGRFAM ID | [TIGR00543] isochorismate synthases |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTGCTG ATCTGAGTTT CAGCAACCTG ATTGCCACCG CGCAGCGGGG CTGGCTTGAA CGCCAGCACG ACGACGGGCT GCTGAGCTTG GCCCTGCCTT TGGATGGCAT CGATCCACTC CAGGGCCTGC CTCAACTGGC CATCGACCAC GCATTCCGTG TGCTTTGGGA CAGCGCGCCC GGCCTCTGCT TTGCCGCCGC CGGCCACTGC CAGCAGCTCG AATTGGCGGG TGCACGCCGC TTCGAGCTGG CCCAACGGTT CGCCGACCTG AGCCTGAGTC GGCTCACTGA CACCAAGCCC GACACGCCAG CTCTCGCCCG ACCCAGGGTG TTGCTGTCGT TTCAATTTTT TGATCAAACC AGTGAGCGCG ACCACAACAC CCACGGCTGC CCATCCGTGC AAGCCGTGTT GCCCCGCTGG CAACTCAGCC GCCAAGGACG ACGGGGATGG CTTCGTCTGA ACGGTGTGGT GAGCAACGCC GCCGAAGCCC GTGAACTGGC CGAGCAACTG TGGTTGAAGC ACCTCGACCT GCAAAACAGA GAATCCGACC AACCCAAACC AAGCTCGGCG ATTCAACTCG ACACCCCCGA CAGCAGCTCT TGGCAACAGC GCTACGCCAG CGCCCTGGAG CGTGGTTTGG AGTTGGTGAA TGGCGGTGAA CTCCACAAAT TGGTTCTGGC GGTACGCCAA TCCATCGATG TGGGCACAAG CTTCGATCCC TTGCCGCTCC TCACCCGCTT GCGGAGTCAA CAGGCCGGCA GCTGCCGCTT TCTTTGGCAA CGCAAGGCCG ACGATGTGTT CTTTGGCGCT TCCCCAGAAC GGCTCTTAAG CCTGCGCGGC GGTTTTCTTC GCAGCGATGC CCTGGCTGGC ACCGCCGGAC CAGGGGACGA CGGCCAGCAA TTGCTCCGCT CCGACAAAGA CCGACGCGAG CATGAACTGG TGGTGGAAAC CATTACCGAC CAGCTACGCC AAAGCGGTCT ATCTCCCTGG CGCCGGTCCC AGCCCCAGCT AGCGCGCCAT GGGCGCCTCA CCCATCTCCA CACACCCATC ACTGCCGCTG CGCAAGGGAA ATCGGTACTG GCACTCGCCG AACAACTGCA CCCCACCCCG GCCGTTGCCG GACTACCCCG CCGCGAAGCG ATGGCCTGGT TACGAACGCT GGAGCCGTTT GAGCGGGGCA ATTACGCCGC ACCGATCGGC TGGATCGACA GCGCTGGAGA TGCCGAACTA CGGGTTGCAA TCCGATGCGG CCATGCCCAA GGACGTCGTT TGGATCTCAC CGCAGGGGCT GGTCTCGTCC GCGGCTCCAT CGCCGAGCGG GAACTTCAAG AAGTGGGCTT AAAGCTTGCT GTTCTCGCCG ATCAGCTGGT TTTGGGGTCG ATGGAGCAAC GCCCCCAAAA CACAGGCAGT CTTAAAAAAC TGCTTTAA
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Protein sequence | MSADLSFSNL IATAQRGWLE RQHDDGLLSL ALPLDGIDPL QGLPQLAIDH AFRVLWDSAP GLCFAAAGHC QQLELAGARR FELAQRFADL SLSRLTDTKP DTPALARPRV LLSFQFFDQT SERDHNTHGC PSVQAVLPRW QLSRQGRRGW LRLNGVVSNA AEARELAEQL WLKHLDLQNR ESDQPKPSSA IQLDTPDSSS WQQRYASALE RGLELVNGGE LHKLVLAVRQ SIDVGTSFDP LPLLTRLRSQ QAGSCRFLWQ RKADDVFFGA SPERLLSLRG GFLRSDALAG TAGPGDDGQQ LLRSDKDRRE HELVVETITD QLRQSGLSPW RRSQPQLARH GRLTHLHTPI TAAAQGKSVL ALAEQLHPTP AVAGLPRREA MAWLRTLEPF ERGNYAAPIG WIDSAGDAEL RVAIRCGHAQ GRRLDLTAGA GLVRGSIAER ELQEVGLKLA VLADQLVLGS MEQRPQNTGS LKKLL
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