Gene Syncc9902_2105 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_2105 
Symbol 
ID3742107 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp2008795 
End bp2009508 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content57% 
IMG OID637772303 
ProductMg-protoporphyrin IX methyl transferase 
Protein accessionYP_378106 
Protein GI78185672 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase 
TIGRFAM ID[TIGR02021] magnesium protoporphyrin O-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCTCCG ATTCACTGCT GACGCAGATC CAGGCCGAAA AGGACGAAGT GAAGGGATAC 
TTCGAAACGA CTGGCTTTGA TCGCTGGAAC CGCATCTACA GCGAAAGCGA CGAGGTGAAC
AAAGTGCAGC GCAACATCCG TATCGGTCAT CAAAAAACCG TGGATGAAGT GGTGAGCTGG
ATCCAAGAGA GCGGCGCCGT GCACAACGTG AGCTTCTGCG ATGCCGGTTG TGGAGTCGGC
AGCCTCAGCC TGCCGTTGGC GGCGATGGGG GCAGGATCCG TCCATGCGAG CGATATTTCC
GCCGCCATGG TTCAAGAAGC AGAGCGTCGC GCCCGCGAAG CCGGCCTCGA CATGGGCAAG
CTGAATTTCT CAGCCAGTGA TCTGGAGAGC CTCCAAGGCT CCTTTCACAC TGTCTGCTGC
CTGGATGTCT TCATCCATTA CCCCCAGCCA GCGGCGGAGG CGATGGTGAA GCATCTCTGT
GGACTAACTC AAGAGCGATT GATCGTGAGC TTCGCGCCAT ACACGCCCCT CCTGGCTCTG
CTCAAAGGGA TCGGCCAACT GTTCCCAGGC CCCAGCAAAA CCACGCGCGC TTACACACTG
AAGGAAACCG GGATCGTGAA AGCTGCAGAA GACTGCGGCT TCAAGCTGGT GCGGCGCAGC
CTTAACAAGG CACCTTTTTA CTTCTCTCGT TTAATCGAAT TCAACAAGAT ATAG
 
Protein sequence
MASDSLLTQI QAEKDEVKGY FETTGFDRWN RIYSESDEVN KVQRNIRIGH QKTVDEVVSW 
IQESGAVHNV SFCDAGCGVG SLSLPLAAMG AGSVHASDIS AAMVQEAERR AREAGLDMGK
LNFSASDLES LQGSFHTVCC LDVFIHYPQP AAEAMVKHLC GLTQERLIVS FAPYTPLLAL
LKGIGQLFPG PSKTTRAYTL KETGIVKAAE DCGFKLVRRS LNKAPFYFSR LIEFNKI