Gene Syncc9902_2090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_2090 
Symbol 
ID3742092 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp1996160 
End bp1997254 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content56% 
IMG OID637772287 
Productputative glycosyltransferase 
Protein accessionYP_378091 
Protein GI78185657 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0472] UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCAGCTG GATTCACCAT CGGGTTGGTT CCTCTCGTAA GACGTCTCGG TCTTCGCTTC 
GGCTTCACCG ACCAGCCCGA TGCTCGGAAG CAACACAGCA CGCCCATCGT GCGTGTTGGT
GGGATCGCGA TGGTCAGCGG TTTTGTTTTG TCGTTGTCGG CCATTTGGCT CTTGGGAGGC
TTTGGCCTTG TGGCTCCCGA ACGTGATCAG CTGATTTGGA GCACCCTCGC TGGCTCACTC
TGTTTCTTCC TGATCGGTTT GGCCGACGAT TTATATGCCC TCTCACCATG GCCCCGTTTG
GCGGGTCAAA TCCTTGTGGC CTCTGCGATC TGGAGCCAGG GAGTTCGCAT AGGCGCCATT
GACTTGCCCT GGCTTAGCTC CACGGGATCA GTGATTCATC TATCCGATGG CCTCAGTTTG
TTGGCCACGG TGATTTGGTT GGTGGGCATC ACAAATGCCA TTAATTGGCT TGATGGTTTG
GATGGGCTTG CCGCAGGCGT TGCTGGAATT GCGGCCATCG GCTTGGTGTC TGTCAGCTTT
TCTTTGCATC AAGTTGCAGC AGGTTTCTTG GCGGCGGCAT TGGCTGGATG CTCGTTGGGC
TTTTTGCGGC ACAACTCCAA TCCGGCCAGG ATTTTTATGG GGGATGGTGG CTCTTATTTT
CTTGGTTTCA CCCTCGCTTC CATCAGCATT GTGGGCCCAG CGAAGGGCCT CACCACGGTG
AGTTTGTTGT TGCCATTGCT GATTCTGTCC TTGCCGCTAG CCGACATGTC GGCAGTGATC
ATGGGGCGGT TGCGGGAAGG CCGATCCCCG TTTTATCCAG ATCGCCGTCA TCTTCATCAC
CGCTTGCTAC GGGCAGGATT CAGTCACCGA CGCACTGTTC TGCTGATTTA CGTGTTTACG
CAGTGGTTGG CATCCATCGC ATTGGTGGTG GCGAATGCAG AAATGCGTTT TCTCTGGTTG
GCTCTTGCGA CGGCAATTCT TGTGGCCACG GTGGTCGTGA GTCGTCGTCA ACTTCAGGCT
GAAAAGGCTT TGCGAGAGAG AACTCCCCAG GATTGTTCTG GGGGATCAAC ACAGCCCGGA
GATCGCCATG GCTAA
 
Protein sequence
MAAGFTIGLV PLVRRLGLRF GFTDQPDARK QHSTPIVRVG GIAMVSGFVL SLSAIWLLGG 
FGLVAPERDQ LIWSTLAGSL CFFLIGLADD LYALSPWPRL AGQILVASAI WSQGVRIGAI
DLPWLSSTGS VIHLSDGLSL LATVIWLVGI TNAINWLDGL DGLAAGVAGI AAIGLVSVSF
SLHQVAAGFL AAALAGCSLG FLRHNSNPAR IFMGDGGSYF LGFTLASISI VGPAKGLTTV
SLLLPLLILS LPLADMSAVI MGRLREGRSP FYPDRRHLHH RLLRAGFSHR RTVLLIYVFT
QWLASIALVV ANAEMRFLWL ALATAILVAT VVVSRRQLQA EKALRERTPQ DCSGGSTQPG
DRHG