| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_2040 |
|---|
| Symbol | |
|---|
| ID | 3743000 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus sp. CC9902 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007513 |
|---|
| Strand | + |
|---|
| Start bp | 1948992 |
|---|
| End bp | 1950086 |
|---|
| Gene Length | 1095 bp |
|---|
| Protein Length | 364 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637772237 |
|---|
| Product | chorismate synthase |
|---|
| Protein accession | YP_378041 |
|---|
| Protein GI | 78185607 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0082] Chorismate synthase |
|---|
| TIGRFAM ID | [TIGR00033] chorismate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGCAGCA GCTTCGGCGA TCTCTTCCGC ATCAGCACCT TCGGTGAATC CCACGGCGGA
GGCGTTGGTG TGATTGTGGA GGGCTGCCCG CCAAGGCTGG AACTGGATTT AGACGAAATC
CAAGCAGAAC TCAACCGTCG CAAACCAGGA CAAAGTCACA TCACCACACC CCGAAAAGAA
GCCGATCAGG TGGAGATTCT GAGTGGCCTG CTGGACGGAA AAACCACCCT GGGCACCCCC
ATTGCCATGT TGGTGCGTAA TAAAGATCAG CGACCCGGGG ATTACTCGGA CATGGCCGTG
GCCTTTCGAC CCTCCCATGC AGATGCCACC TATCAATCCA AATACGGCAT CCAAGCCCGT
AGCGGTGGCG GACGAGCATC AGCCCGAGAA ACCATTGGCA GAGTGGCGGC TGGCGCCATT
GCCAAACAAC TTTTGCGTAA AGCAGCTGGA ACTGAAATCC TGGCGTGGGT GAAGCAGATT
CACACAATCG AAGCCCATGG CATCGACCCA TCCACGGTTT CCATGAATGA CATTGAAGCC
AACATTGTGC GCTGTCCAGA AGCCTCCGTG GCCAACCAGA TGATCGAGCG CATTGAGGCG
ATTGGCCGAG AAGGCGATTC CTGCGGTGGA GTGATCGAGT GCGTTGTCAG GCAGCCTGCC
GTGGGACTAG GGATGCCGGT CTTCGACAAA TTGGAAGCCG ATCTCGCCAA GGCGGTGATG
TCGCTACCAG CCACGAAGGG ATTTGAGATC GGCTCAGGGT TTAGTGGAAC CCTCTTAAAA
GGCAGCGAAC ACAATGACGC CTTCATCCCA GGAGACGATG GCCGCCTCCA TACCGCCACG
AACAACTCCG GGGGCATCCA AGGCGGGATC AGCAACGGAG AACCGATCGT GATCAGAGTG
GGATTCAAAC CAACGGCCAC CATTCGCAAA GAACAGCAGA CCATCGACTC TGATGGCAAT
GCGACAACCC TGGCCGCAAA AGGGCGTCAC GACCCCTGCG TACTGCCTCG GGCCGTACCC
ATGGTGGAAG CGATGGTGGC CCTGACGCTG GCAGATCATC TGCTCAGACA ACAGGGCCAA
TGCAGCCTGT GGTGA
|
|---|
| Protein sequence | MGSSFGDLFR ISTFGESHGG GVGVIVEGCP PRLELDLDEI QAELNRRKPG QSHITTPRKE
ADQVEILSGL LDGKTTLGTP IAMLVRNKDQ RPGDYSDMAV AFRPSHADAT YQSKYGIQAR
SGGGRASARE TIGRVAAGAI AKQLLRKAAG TEILAWVKQI HTIEAHGIDP STVSMNDIEA
NIVRCPEASV ANQMIERIEA IGREGDSCGG VIECVVRQPA VGLGMPVFDK LEADLAKAVM
SLPATKGFEI GSGFSGTLLK GSEHNDAFIP GDDGRLHTAT NNSGGIQGGI SNGEPIVIRV
GFKPTATIRK EQQTIDSDGN ATTLAAKGRH DPCVLPRAVP MVEAMVALTL ADHLLRQQGQ
CSLW
|
|---|
| |