Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9902_2022 |
Symbol | tuf |
ID | 3742062 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9902 |
Kingdom | Bacteria |
Replicon accession | NC_007513 |
Strand | + |
Start bp | 1929159 |
End bp | 1930358 |
Gene Length | 1200 bp |
Protein Length | 399 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637772219 |
Product | elongation factor Tu |
Protein accession | YP_378023 |
Protein GI | 78185589 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0050] GTPases - translation elongation factors |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR00485] translation elongation factor TU |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.466852 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCACGCG AGAAGTTCGA AAGGAACAAG CCCCACGTCA ACATCGGCAC CATCGGCCAC GTTGACCACG GCAAAACCAC GCTGACTGCA GCTATCACCA ATGTGCTCGC CAAGAAAGGG CAAGCGCAGG TTCAAAACTA TGCCGATATT GACGGTGCTC CAGAGGAGCG CGAGCGCGGT ATCACCATCA ACACTGCCCA CGTTGAGTAC GAAACCGAAA AGCGTCACTA CGCCCACGTT GACTGCCCTG GACACGCTGA TTATGTGAAA AACATGATCA CGGGTGCTGC CCAAATGGAT GGCGCAATCC TGGTTTGTGC CGCCACAGAT GGCCCGATGG CGCAAACCAA GGAGCACATC CTCCTAGCTA AGCAAGTTGG CGTGCCCGCA CTGGTTGTTG CTTTAAACAA GTGCGACATG GTCGATGACG AAGAGATCAT CGAGTTGGTG GAAATGGAAA TTCGTGAGCT GCTGTCCAGC TACGACTTCC CCGGCGACGA CATTCCCGTT ATCCAGGTCT CTGGCTTGAA AGCCATTGAG GGAGAAGCTG AGTGGGAAGC CAAGATCGAT GAGTTAATGG ACGCTGTGGA TGCAAGCATC CCCGAGCCCG AGCGCGAAGT CGATAAGCCG TTCTTGATGG CTATTGAAGA TGTGTTCTCC ATCACGGGCC GAGGCACGGT TGCTACCGGT CGTATCGAGC GTGGCATCGT CAAAGTTGGC GAAGAAGTTG AAGTAGTCGG CATCCGCGAC CCCCGTAAAA CCACCGTTAC TGGTGTGGAA ATGTTCCGCA AATTGCTCGA TGAGGGCATG GCGGGTGACA ACGTTGGTCT CCTGCTTCGC GGTATTCAGA AGGAAGACAT CGAGCGCGGC ATGGTGTTGG TGAAGCCTGG CTCCATCACA CCTCACACCA AGTTCGAAGG TCAGGTGTAC GTCTTGAAGA AAGAAGAAGG CGGTCGCCAC ACTCCTTTCT TTGCTGGCTA TCGCCCGCAG TTCTACATCC GTACAACGGA CGTGACTGGC CAAATCACCG CATTCACAGC GGAAGACGGC TCCAACGTGG AAATGGTGAT GCCTGGTGAC AACATCCAGA TGACCGGTGA GCTGATCTGC CCAGTGGCCA TGGAAATGGG CATGCGCTTC GCAATCCGTG AAGGCGGCCG CACCATCGGT GCTGGTGTGG TGTCCAAGAT CATCGAATGA
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Protein sequence | MAREKFERNK PHVNIGTIGH VDHGKTTLTA AITNVLAKKG QAQVQNYADI DGAPEERERG ITINTAHVEY ETEKRHYAHV DCPGHADYVK NMITGAAQMD GAILVCAATD GPMAQTKEHI LLAKQVGVPA LVVALNKCDM VDDEEIIELV EMEIRELLSS YDFPGDDIPV IQVSGLKAIE GEAEWEAKID ELMDAVDASI PEPEREVDKP FLMAIEDVFS ITGRGTVATG RIERGIVKVG EEVEVVGIRD PRKTTVTGVE MFRKLLDEGM AGDNVGLLLR GIQKEDIERG MVLVKPGSIT PHTKFEGQVY VLKKEEGGRH TPFFAGYRPQ FYIRTTDVTG QITAFTAEDG SNVEMVMPGD NIQMTGELIC PVAMEMGMRF AIREGGRTIG AGVVSKIIE
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