| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_2016 |
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| Symbol | |
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| ID | 3742056 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus sp. CC9902 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007513 |
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| Strand | - |
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| Start bp | 1919231 |
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| End bp | 1923838 |
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| Gene Length | 4608 bp |
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| Protein Length | 1535 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637772213 |
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| Product | glutamate synthase (NADPH) |
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| Protein accession | YP_378017 |
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| Protein GI | 78185583 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0069] Glutamate synthase domain 2 |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTATGT CTGAAGCCAT CCGTCCCTCA GCTTGGCCAT ACAGCGACAG CGCTGCTCCT
GATGCCGTGG CTGGTGAGAA GGACGCGTGC GGCGTTGGTT TTCTTGCTCA GCTGTCAGGG
AAAGCCAGTC ATTGGGTGTT GCAACAAGCC CTGCGAGGAC TTGGGTGTAT GGAACATCGC
GGTGGCTGTG GCGGCGATGG TGATTCCGGC GATGGCGCCG GAATCTTGTG TGGCATTCCA
TGGAATTACC TCAGGGCGGT CTGGCCAGAA GCCAGTGCTG CTAAGGGCCT TGGCATGATG
TTCATGCCAA CCAATCCGGC CAGCCGCGCC GCTGTGCGCG CCTGTTGCGA TGCCGAAGCA
AAAGCTTTGG GCTTGTCGCC CTTGGGATGG CGTGAGGTGC CGATCGACCC ATCGGTTTTG
GGGGAGTTGG CACGGCAGAC CGCCCCCGCT ATTGAGCAGT GGGCATTGGA TGGAGCGGAT
GATGGAGATG CCCTTGAAGC TCTCTTACTT CGCCTTCGCA GGCGAGTCGG TGCACGGGCG
CGTCAGGAGT TGGGCTCCGA CCAAGTTCAA GACTTCTATG TCACCTCCCT GAGCAGCCGC
ACCGTTGTGT ACAAGGGCAT GGTGCGTTCA GAGGTGTTGG AGCGTTATTA CGCCGACCTT
CGTGATCCGC GCTTTGAAGT GAGCTTTGCG GTGTACCACC GTCGCTTCAG TACAAACACT
CTTCCTCGTT GGCCGTTGGC GCAGCCCATG CGAATGCTGG GTCATAACGG TGAAATCAAT
ACCCTTCTGG GCAATCTCAA TTGGGCGAAA GCATCGGAAG CCAATCTCCA CAACGTTTGG
GGTGAGGCAT CGGCTGATCT GATCCCTGTC GTGAATCCGG CGTTCAGTGA TTCGGCGAAT
CTCGATGCAA CGTTGGAGTT GATGGTCCGC AGTGGCCGTT CCATTACGGA CAGCCTGATC
ACGTTGGTGC CGGAGGCTTT CCGCAATCAG CCGGACCTCG ATCGCCGTCC TGATGTGACC
GCGATGTATG AGTTCAATGC GGGGATTCAG GAGCCCTGGG ATGGCCCTGC GCTGCTGGTG
TTTGCCGATG GCAAACGGGT TGGAGCGACG TTGGATCGCA ATGGCTTGAG ACCAGCGCGT
TGGTGTACCA CCAGCGATGG TTTCGTGATC ATGGGCTCAG AAACCGGTGT GGTCGATTTA
ACCGACAAGA CCATCGTCCA GAAAGGTCGA TTGGGCCCTG GTCAAATGTT GGCCGTCGAC
TTAGAAACCG GCCAACTTCT CGATAATTGG GCTGTAAAGG AAGACGCTGC CCAACGTTTT
CCTTATGCAG ATTGGTTGCA TCAACACCGT TCCTCTGTAT CAGCGCAGCC GTGGGTTGAG
GCGCGCTGCA TGGGAGAGCT CGATCTGTTG CGTCTGCAGA CGGCGATGGG CTTCACCGCC
GAAGACCTCG ATCTGGTGAT CGAAGACATG GCTGGCCTTG GCAAGGAGCC CACGTACTGC
ATGGGGGACG ACATCCCACT AGCAGTTCTG TCTGACCGCC CCCATTTGCT GTACGACTAC
TTCAAGCAAC GGTTCGCACA GGTCACGAAC CCGCCCATTG ATCCGCTTCG CGAGAAGTTG
GTGATGAGTC TGGAAATGCA TCTGGGTGAG CGTCGCCCAG CCTTGAAGCC TGAGGCCAAG
GCTGCTGCAG TGATTCACCT CGATAGCCCG GTGCTCAATG AAACTGAGTT AGCGGCTCTC
TCTCAGCAAG GCCTTCCGGT CAGGATGCTG TCCACTCAAG TGGCCGTTGA AGCCTGTGCT
GGCGGATTGG GCACTGCTCT GAACGATCTA TGCAAAAACG CTGAACAGCT CGTGCGCGAT
GGGGCACAAG TGTTGGTGTT ATCGGACCGT GTTCGGGCGG ATGGCCAACC TTCAGAGCTC
AGTGCCACAA CGGTGGCGAT GCCCGCCCTC TTGGCCGTTG GAGCGGTGCA TCACCACCTC
CTGCGCCAAA AGCTGCGGTT GCAATGTTCT TTGGTTGCCG ATACGGCTCA ATGTTGGAGC
ACGCATCACA TGGCCTGTTT GATCGGCTAT GGGGCGAGTG CTGTATGCCC ATGGCTGACG
TGGGAAACGA CCCGCCACTG GTTGGAGCAT CCCAAAACTC AAAAGCGGAT TGAGCAGGGC
AAACTTCCCT CCCTTGACGC TGTCAAAGCT CAAGAGAACG TTCGCATCTC TCTGGAAAAT
GGCTTGCGCA AGATCCTCTC AAAGATTGGG ATCTCCTTGC TAGCGAGCTA TCACGGTGCA
CAAATTTTTG AGGCCATCGG CCTCGGTGCA GACGTGATTG AGATGGCGTT TTCCGGCACC
ACCAGTCGTG TGGCCGGGAT GACCCTTGCT GAACTCGCCA ACGAAACCCT GTCGTTGCAT
GCCAAGGCTT TCCCCGAGCT CAACCGCAGC AAGCTCGAAT TTATGGGTTT TGTGCAGTAC
CGCTCGGGTG GTGAATTCCA CCTGAACAGT CCAGATATGT CGAAGGCGCT GCACGCTGCC
GTGAAAACTG GCCCTGGATA CGACCACTTT TCCACCTACA AAACACTGCT GGAGAACCGT
CCAGTTACTG CGTTACGCGA TTTGTTGGAG TTCAAGATCG CTTCAACCCC ACGTCCCCTC
GATCAGGTGG AAAGCGTGGA AAGTTTGTGC AGCAGATTTT GCACCGGTGG CATGAGTCTT
GGTGCCTTGT CGCGGGAGGC CCATGAGGTC CTTGCCGTGG CGATGAATCG CATCGGTGGC
AAGAGCAATA GTGGTGAAGG TGGTGAAGAT CCAGCTCGTT TCCAGGTCTT GAGTGATGTC
GATGCGGAAG GCAGGTCCGC AGCGTTTCCG AGCATCGGAG GGTTGCGCAA TGGCGACACC
GCAAGTTCGG CGATTAAGCA GATCGCGTCA GGGCGGTTTG GGGTCACAGC GGAATACCTC
CGTAGTGCCA AACAGTTAGA GATCAAGGTG GCCCAAGGCG CCAAACCGGG TGAAGGGGGC
CAGCTGCCAG GTCCCAAGGT TGATAACTAC ATCGCCTGGT TGCGCAACAG CAAACCGGGT
GTGGCCTTGA TCTCTCCGCC TCCCCATCAC GACATTTACT CAATTGAAGA CCTGGCTCAG
CTCATTCATG ATTTGCACCA GGTGCATCCC AAGGCTCCAG TCAGCGTCAA ATTGGTGTCT
GAAATAGGGA TCGGCACCAT TGCCGCTGGC GTGGCGAAAG CCAACGCCGA TGTGATTCAG
ATTTCTGGCC ATGACGGCGG TACAGGAGCG TCACCCCTCA GTTCGATTAA GCACGCCGGT
AGCCCTTGGG AACTTGGCCT CACTGAAGTG CATCGCTCTC TGTTGGAAAA CGGATTGCGT
GATCGAGTTC TGCTTCGGGC CGATGGGGGC CTGAAAACGG GTTGGGATGT TGTGATCGCA
GCGATGTTGG GTGCCGAGGA ATTTGGCTTT GGTTCGGTGG CGATGATTGC TGAGGGCTGC
ATCATGGCCC GCGTTTGCCA CACCAATAAT TGCCCGGTCG GTGTTGCGAC TCAGAAAGAA
GCACTGCGAA AACGCTTTAA GGGAGTGCCT GAGCATGTGG TGAACTTCTT TTGGTTTGTG
GCCGAAGAGG TTCGCCAGCT GCTGAGCCTT TTGGGGATGG CCAAGCTTGA GGATTTGATC
GGTCGAACCG ACCTATTGCA GACCCGTGCC GTTGATTTGG CGAAAACCAG CTGTGTTGAT
CTATCCAGCC TCTTGGCTCC CATTGCCGGT TCTGAAGATC GCTCTTGGCT CACCCATAGC
GCTACGGCTC ACGGCAATGG CCCCATCCTC GAAGATGATT TTCTGGCAGA TCGTGAGTTG
ATGGAGGCCG TTGAGAACCA CAGCGATCTG AGTCGCATCA CTGAAATCAT CAATACCGAT
CGCAGTGTTT GTGCTCGTTT GGCTGGGGAG TTGGCCCAGC TCCATGGCAA TCGAGGTTTC
AAGGGCCAGC TTGATCTCAC ATTCCGTGGA GCTGCCGGAC AAAGTTTTGG TGCCTTCCTC
GTTCAAGGGA TGAATGTGCG TCTCGAAGGA GAAGCCAACG ATTACGTGGG TAAAGGGATG
AATAGTGGTC GGATCACATT GGTCCCCAGT GATGGCACCC CAAATCCTGG TGAGCAGGTG
ATCCTTGGCA ATACCTGTCT CTACGGGGCA ACAGGAGGTG AGTTGTTTGC CTACGGCAGA
GCTGGCGAAC GCTTCGGTGT GCGTAACAGC GGTGCGAAAA CCGTCGTAGA AGGTGCCGGG
GACCACTGCT GTGAATACAT GACGGGCGGT GTGGTCGTGG TACTCGGCAG CACAGGGCGA
AATATCGGTG CTGGGATGAC CGGTGGCGTC GCCTTTTTGT TGGATGACAC GGGTGGTGTG
ACGCCTCGCG TGAATCCAGA AATTGTTGAG GTCTGCGCTC TCACAACGGG AGAGCAAGAC
GCCATGCTCA AGGATTTGTT GGAGCGCTAT TTGGCGGTCA CTGGAAGTGA AAAAGCTTCC
GAACTTCTGG CGGACTGGCC TACTGCTAAA TCCCGCTTCA AGGTGCTGGT GCCTCCGAGC
GAACGGGCTC CCATGGGGCT CACCGAGAAA CAGGCCGTCG CGGCCTAA
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| Protein sequence | MFMSEAIRPS AWPYSDSAAP DAVAGEKDAC GVGFLAQLSG KASHWVLQQA LRGLGCMEHR
GGCGGDGDSG DGAGILCGIP WNYLRAVWPE ASAAKGLGMM FMPTNPASRA AVRACCDAEA
KALGLSPLGW REVPIDPSVL GELARQTAPA IEQWALDGAD DGDALEALLL RLRRRVGARA
RQELGSDQVQ DFYVTSLSSR TVVYKGMVRS EVLERYYADL RDPRFEVSFA VYHRRFSTNT
LPRWPLAQPM RMLGHNGEIN TLLGNLNWAK ASEANLHNVW GEASADLIPV VNPAFSDSAN
LDATLELMVR SGRSITDSLI TLVPEAFRNQ PDLDRRPDVT AMYEFNAGIQ EPWDGPALLV
FADGKRVGAT LDRNGLRPAR WCTTSDGFVI MGSETGVVDL TDKTIVQKGR LGPGQMLAVD
LETGQLLDNW AVKEDAAQRF PYADWLHQHR SSVSAQPWVE ARCMGELDLL RLQTAMGFTA
EDLDLVIEDM AGLGKEPTYC MGDDIPLAVL SDRPHLLYDY FKQRFAQVTN PPIDPLREKL
VMSLEMHLGE RRPALKPEAK AAAVIHLDSP VLNETELAAL SQQGLPVRML STQVAVEACA
GGLGTALNDL CKNAEQLVRD GAQVLVLSDR VRADGQPSEL SATTVAMPAL LAVGAVHHHL
LRQKLRLQCS LVADTAQCWS THHMACLIGY GASAVCPWLT WETTRHWLEH PKTQKRIEQG
KLPSLDAVKA QENVRISLEN GLRKILSKIG ISLLASYHGA QIFEAIGLGA DVIEMAFSGT
TSRVAGMTLA ELANETLSLH AKAFPELNRS KLEFMGFVQY RSGGEFHLNS PDMSKALHAA
VKTGPGYDHF STYKTLLENR PVTALRDLLE FKIASTPRPL DQVESVESLC SRFCTGGMSL
GALSREAHEV LAVAMNRIGG KSNSGEGGED PARFQVLSDV DAEGRSAAFP SIGGLRNGDT
ASSAIKQIAS GRFGVTAEYL RSAKQLEIKV AQGAKPGEGG QLPGPKVDNY IAWLRNSKPG
VALISPPPHH DIYSIEDLAQ LIHDLHQVHP KAPVSVKLVS EIGIGTIAAG VAKANADVIQ
ISGHDGGTGA SPLSSIKHAG SPWELGLTEV HRSLLENGLR DRVLLRADGG LKTGWDVVIA
AMLGAEEFGF GSVAMIAEGC IMARVCHTNN CPVGVATQKE ALRKRFKGVP EHVVNFFWFV
AEEVRQLLSL LGMAKLEDLI GRTDLLQTRA VDLAKTSCVD LSSLLAPIAG SEDRSWLTHS
ATAHGNGPIL EDDFLADREL MEAVENHSDL SRITEIINTD RSVCARLAGE LAQLHGNRGF
KGQLDLTFRG AAGQSFGAFL VQGMNVRLEG EANDYVGKGM NSGRITLVPS DGTPNPGEQV
ILGNTCLYGA TGGELFAYGR AGERFGVRNS GAKTVVEGAG DHCCEYMTGG VVVVLGSTGR
NIGAGMTGGV AFLLDDTGGV TPRVNPEIVE VCALTTGEQD AMLKDLLERY LAVTGSEKAS
ELLADWPTAK SRFKVLVPPS ERAPMGLTEK QAVAA
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